bugfix for showing plots

suppress plt.show

cleanup and some docs

deleting files from repo, general cleanup, shouldn't impact package much. also rolls in the bugfix.

linear + inverse problem comparison examples

BIP vs SIP example and Linear Contours examples added. Folders generated automatically. This completes all but the high-dimensional linear examples needed for the paper as an MVP (still plenty of to-dos, cleanup required).

data pre-packaged for console scripts

testing that pde and ode can be run from ANYWHERE in your filesystem.

command-line runtime

a lot of code added, poisson file centralized. lazy loading of fenics. support for doctests. can run without fenics if using pre-packaged data.

ode migration + initial scripts

migrating code from mud-paper repo, adding in ODE example + comparison with MAP point solution

contour plot updates

allowing for comparisons of MAP / MUD on same figure

pde helpers, datasets module

extras is now datasets and some new pde-related experiment orchestration code has been added.

change test -> save in plotting

argument swaps, plus poisson plotting

linear examples

Code to generate the linear examples is migrated, with the exception of plotting functionality.