Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

xmfa to maf #22

Open
TANG-Furong opened this issue Aug 2, 2022 · 0 comments
Open

xmfa to maf #22

TANG-Furong opened this issue Aug 2, 2022 · 0 comments

Comments

@TANG-Furong
Copy link

Hi,
is it possible to convert the xmfa file from Parsnp (1.7.4) to maf file?
I tried harvest-tools, but it seems do not have this function.
I also tried xmfa2maf (from Mauve https://github.com/Wyss/mauve-py/blob/master/mauve/src/mauveAligner/src/xmfa2maf.cpp), which failed to recognize the character "=" in between the alignment blocks.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

1 participant