dependencies.rst

Prerequisites

To build pyGIMLi from source, the following tools are required:

• subversion, git, mercurial, wget, tar

• cmake >= 2.8.10

• gcc >= 4.4

• >=Python-3.5 | >=Python-2.7

• numpy-dev

• >=matplotlib-1.3.0

• >=clang++-3.6.0 (3.7.0, 3.8.0)

• libclang-3.7-dev

• >=llvm-3.6.0 (3.7.0, 3.8.0)

• libz-dev

• python-setuptools

  tested on:

  • gentoo x86_64: gcc-4.4.5, gcc-4.5.3, gcc-4.5.4, gcc-4.9.2 gcc-5.3.0
  • Debian 3.2.46-1 x86_64: gcc-4.7.2
  • Ubuntu 16.04 LTS with gcc-5.4.0
  • Arch Linux gcc-5.2.0
  • CentOS
  • MinGW32: gcc-4.6.2/4, gcc-4.7.2, gcc-5.2.0
  • MinGW64: gcc-4.5.4, gcc-5.2.0, gcc-6.3.0, gcc-7.1.0

Optional Prerequisites

These tools can be installed system-wide with your native package manager (i.e. apt-get). If not found, the provided build scripts will automatically download and compile the necessary components.

• libboost >=1.46 (thread, python) (1.46, 1.48, 1.49, 1.51, 1.52, 1.53, 1.57)
• blas and lapack for suitesparse (system or auto via cmake)
• SuiteSparse (http://faculty.cse.tamu.edu/davis/suitesparse.html)
• cppunit
• procps
• triangle (http://www.cs.cmu.edu/~quake/triangle.html)

Prerequisites automatically installed by the installer

These tools are required to create the Python bindings and are likely to be outdated in your distribution and should therefore not be installed system-wide. The build scripts will install them automatically.

• castxml
• pygccxml
• pyplusplus