04-references.Rmd

`r if (knitr::is_html_output()) '
# References {-}
'`
- [Introduction to Data Science with R](http://shop.oreilly.com/product/0636920034834.do)
- [RNAseq Analysis tutorials in R](https://bioinformatics-core-shared-training.github.io/RNAseq-R/) and [Differential expression Analysis](https://combine-australia.github.io/RNAseq-R/06-rnaseq-day1.html)
- [Data Manipulation and Visualization using R](http://bioinformatics-core-shared-training.github.io/r-intermediate/)
- [RNAseq data analysis workflow](https://github.com/griffithlab/rnaseq_tutorial) 
- [Setting up reproducible projects in R](https://nicercode.github.io/blog/2013-04-05-projects/) and [package management for reproducible R code](https://rviews.rstudio.com/2018/01/18/package-management-for-reproducible-r-code/) and [reproducibility good practices](https://github.com/karthik/rstudio2019)
- [Yeast pathway analysis in R](https://bioconductor.org/packages/release/bioc/vignettes/ReactomePA/inst/doc/ReactomePA.html)   
- [Additional resources from UCSF Data Science Initiative](https://courses.ucsf.edu/course/index.php?categoryid=499)