You signed in with another tab or window. Reload to refresh your session.You signed out in another tab or window. Reload to refresh your session.You switched accounts on another tab or window. Reload to refresh your session.Dismiss alert
I tried to run TF-modisco on different subsets of data and got the following error for one of the subsets (other works fine):
Traceback (most recent call last):
File "TF_modisco.py", line 207, in <module>
main([model], data, "modisco/")
File "TF_modisco.py", line 173, in main
run_modisco(hyp_impscores=hyp_ex_list, impscores=ex_list, onehot_data=features, modisco_path=modisco_path)
File "TF_modisco.py", line 67, in run_modisco
**nulldist_args)
File "/users/agnon/year2016/yaishof/.conda/envs/ofir_env/lib/python3.6/site-packages/modisco/tfmodisco_workflow/workflow.py", line 377, in __call__
metacluster_seqlets)
File "/users/agnon/year2016/yaishof/.conda/envs/ofir_env/lib/python3.6/site-packages/modisco/tfmodisco_workflow/seqlets_to_patterns.py", line 913, in __call__
patterns=split_patterns)
File "/users/agnon/year2016/yaishof/.conda/envs/ofir_env/lib/python3.6/site-packages/modisco/aggregator.py", line 1007, in __call__
assert len(new_pattern)==1
AssertionError
I tried to run TF-modisco on different subsets of data and got the following error for one of the subsets (other works fine):
What can be the problem?
the full output:
output.txt
The text was updated successfully, but these errors were encountered: