From d3a8997e9da8f659a33618f69a5f077209c01776 Mon Sep 17 00:00:00 2001
From: Leonid Kostrykin <void@evoid.de>
Date: Tue, 19 Mar 2024 15:45:32 +0100
Subject: [PATCH] Update requirements using `@TOOL_VERSION@` macro

---
 tools/2d_auto_threshold/auto_threshold.xml                 | 2 +-
 tools/2d_feature_extraction/2d_feature_extraction.xml      | 2 +-
 tools/2d_histogram_equalization/histogram_equalization.xml | 2 +-
 tools/2d_simple_filter/filter.xml                          | 2 +-
 tools/anisotropic_diffusion/anisotropic_diffusion.xml      | 2 +-
 tools/bfconvert/bfconvert.xml                              | 2 +-
 tools/colorize_labels/colorize_labels.xml                  | 2 +-
 tools/voronoi_tessellation/voronoi_tessellation.xml        | 2 +-
 8 files changed, 8 insertions(+), 8 deletions(-)

diff --git a/tools/2d_auto_threshold/auto_threshold.xml b/tools/2d_auto_threshold/auto_threshold.xml
index e93d4f91..02e5b247 100644
--- a/tools/2d_auto_threshold/auto_threshold.xml
+++ b/tools/2d_auto_threshold/auto_threshold.xml
@@ -20,7 +20,7 @@
         <xref type="biii">scikit-image</xref>
     </xrefs>
     <requirements> 
-        <requirement type="package" version="0.18.1">scikit-image</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">scikit-image</requirement>
         <requirement type="package" version="2020.10.1">tifffile</requirement>
     </requirements>
     <command detect_errors="aggressive">
diff --git a/tools/2d_feature_extraction/2d_feature_extraction.xml b/tools/2d_feature_extraction/2d_feature_extraction.xml
index fbb1aa50..ebbc8bb3 100644
--- a/tools/2d_feature_extraction/2d_feature_extraction.xml
+++ b/tools/2d_feature_extraction/2d_feature_extraction.xml
@@ -16,8 +16,8 @@
         <xref type="biii">scikit-image</xref>
     </xrefs>
     <requirements> 
+        <requirement type="package" version="@TOOL_VERSION@">scikit-image</requirement>
         <requirement type="package" version="0.23.4">pandas</requirement>
-        <requirement type="package" version="0.14.2">scikit-image</requirement>
         <requirement type="package" version="1.15.4">numpy</requirement>
         <requirement type="package" version="0.15.1">tifffile</requirement>
     </requirements>
diff --git a/tools/2d_histogram_equalization/histogram_equalization.xml b/tools/2d_histogram_equalization/histogram_equalization.xml
index 028259a3..d41e668e 100644
--- a/tools/2d_histogram_equalization/histogram_equalization.xml
+++ b/tools/2d_histogram_equalization/histogram_equalization.xml
@@ -17,7 +17,7 @@
         <xref type="biii">scikit-image</xref>
     </xrefs>
     <requirements> 
-        <requirement type="package" version="0.14.2">scikit-image</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">scikit-image</requirement>
         <requirement type="package" version="1.15.4">numpy</requirement>
         <requirement type="package" version="5.3.0">pillow</requirement>
         <requirement type="package" version="0.15.1">tifffile</requirement>
diff --git a/tools/2d_simple_filter/filter.xml b/tools/2d_simple_filter/filter.xml
index 9bc15679..b2b58e9c 100644
--- a/tools/2d_simple_filter/filter.xml
+++ b/tools/2d_simple_filter/filter.xml
@@ -16,7 +16,7 @@
         <xref type="biii">scipy</xref>
     </xrefs>
     <requirements>
-        <requirement type="package" version="1.12.0">scipy</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">scipy</requirement>
         <requirement type="package" version="1.26.4">numpy</requirement>
         <requirement type="package" version="0.22.0">scikit-image</requirement>
         <requirement type="package" version="2024.2.12">tifffile</requirement>
diff --git a/tools/anisotropic_diffusion/anisotropic_diffusion.xml b/tools/anisotropic_diffusion/anisotropic_diffusion.xml
index 32deef4a..2dab21c5 100644
--- a/tools/anisotropic_diffusion/anisotropic_diffusion.xml
+++ b/tools/anisotropic_diffusion/anisotropic_diffusion.xml
@@ -13,9 +13,9 @@
         <edam_operation>operation_3443</edam_operation>
     </edam_operations>
     <requirements>
+        <requirement type="package" version="@TOOL_VERSION@">medpy</requirement>
         <requirement type="package" version="1.20">numpy</requirement>
         <requirement type="package" version="0.18.1">scikit-image</requirement>
-        <requirement type="package" version="0.4.0">medpy</requirement>
     </requirements> 
     <command detect_errors="aggressive">
         <![CDATA[
diff --git a/tools/bfconvert/bfconvert.xml b/tools/bfconvert/bfconvert.xml
index c020b2df..4c2060b0 100644
--- a/tools/bfconvert/bfconvert.xml
+++ b/tools/bfconvert/bfconvert.xml
@@ -17,7 +17,7 @@
         <xref type="biii">python-bioformats</xref>
     </xrefs>
     <requirements>
-        <requirement type="package" version="6.7.0">bftools</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">bftools</requirement>
     </requirements>
     <command> 
         <![CDATA[  
diff --git a/tools/colorize_labels/colorize_labels.xml b/tools/colorize_labels/colorize_labels.xml
index ff2b65e8..7985bd5e 100644
--- a/tools/colorize_labels/colorize_labels.xml
+++ b/tools/colorize_labels/colorize_labels.xml
@@ -13,7 +13,7 @@
         <edam_operation>operation_3443</edam_operation>
     </edam_operations>
     <requirements>
-        <requirement type="package" version="3.2.1">networkx</requirement>
+        <requirement type="package" version="@TOOL_VERSION@">networkx</requirement>
         <requirement type="package" version="1.22">numpy</requirement>
         <requirement type="package" version="0.18.1">scikit-image</requirement>
     </requirements>
diff --git a/tools/voronoi_tessellation/voronoi_tessellation.xml b/tools/voronoi_tessellation/voronoi_tessellation.xml
index a3e12307..75d7a536 100644
--- a/tools/voronoi_tessellation/voronoi_tessellation.xml
+++ b/tools/voronoi_tessellation/voronoi_tessellation.xml
@@ -13,9 +13,9 @@
         <xref type="biii">scikit-image</xref>
     </xrefs>
     <requirements>
+        <requirement type="package" version="@TOOL_VERSION@">scikit-image</requirement>
         <requirement type="package" version="1.26.4">numpy</requirement>
         <requirement type="package" version="1.12.0">scipy</requirement>
-        <requirement type="package" version="0.22.0">scikit-image</requirement>
     </requirements>
     <command><![CDATA[