Protocol in markdown

[alistairewj]

For the v1 of the protocol in markdown, we want:

• All the steps currently in the PlanDefinition
• Reference our Questionnaire resources as appropriate
• Add back text from protocol word document which provides context for questionnaires
• Add an "Edit on GitHub" button which opens up an edit window for the protocol.md on GitHub
  • https://github.com/kind-lab/voice-biomarker-fhir/edit/main/input/pagecontent/protocol.md

[alistairewj]

Additional tasks

• SurveyCompletion - who is completing the survey
• EligibleStudies - study the individual will enroll in (currently a broken link - Questionnaire-EligibleStudies.html)
• Consent
  • questionnaires exist but links might need fixing in protocol.md
  • Questionnaire-MainICF.html
  • Questionnaire-MainICFResearcherStatement.html
  • Questionnaire-MainICFCombinedPDF.html
  • Questionnaire-AddendumWCM.html
  • Questionnaire-AddendumWCMResearcherStatement.html
  • Questionnaire-AddendumCombinedPDF.html
  • these questionnaires look like they need cleaning up - lots of ambiguously named attributes
• Acoustic Tasks
  • The existing plan definition needs to be converted into a Questionnaire. Audio completions are attachments.
  • PlanDefinition-VbaiPlanDefinitionAcousticTasksGeneralExample.html
• Mood acoustic tasks - convert the current text into a questionnaire resource
• Voice acoustic tasks - convert the current text into a questionnaire resource
• Pediatric acoustic tasks - convert the current text into a questionnaire resource
• Respiratory acoustic tasks - convert the current text into a questionnaire resource

questions for the team

• Should confounders be asked before the acoustic task? Need to ask Teaming core.
• Do we actually need cohort specific confounders, if we redefine confounders to be "session specific confounders for acoustics?". Argument is we would want to collect it for everyone.
• Need to figure out how we are handling session ID. I believe it does not go in the questionnaire at all, and is metadata collected around the questionnaire.

typo Voice "PatientQueestionnaire"
serverity in one of the filenames