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I have the error following error when trying to run GENESPACE with the latest OrthoFinder from bioconda: 3.0.1b1 :
Warning message:
In get_orthofinderVersion(path2orthofinder) : NAs introduced by coercion
...
Could not find a valid path to the orthofinder program from R
The issue seems to be in utils.get_orthofinderVersion where the conversion to numeric fails at line 827 with the patch version (1b1):
Hello,
I have the error following error when trying to run GENESPACE with the latest OrthoFinder from bioconda: 3.0.1b1 :
Warning message: In get_orthofinderVersion(path2orthofinder) : NAs introduced by coercion ... Could not find a valid path to the orthofinder program from R
The issue seems to be in
utils.get_orthofinderVersion
where the conversion to numeric fails at line 827 with the patch version (1b1
):Regards,
Olivier
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