diff --git a/lib/config/index.js b/lib/config/index.js
index 8e8fb8c7e..145609f33 100644
--- a/lib/config/index.js
+++ b/lib/config/index.js
@@ -504,7 +504,7 @@ function initPrompts(newProject) {
   })
   // jspm config folder
   .then(function() {
-    if (promptType == 'custom' || promptType == 'quick')
+    if (promptType == 'custom')
       return;
 
     // to make the prompts simple, we assume the config files are called jspm.config.js and
diff --git a/lib/config/loader.js b/lib/config/loader.js
index 5c31432ad..d6617984d 100644
--- a/lib/config/loader.js
+++ b/lib/config/loader.js
@@ -420,17 +420,15 @@ Object.defineProperty(JspmSystemConfig.prototype, 'nodePackagesURL', {
   },
   set: function(packagesURL) {
     var self = this;
-    var curPackagesURL = this.nodePackagesURL;
 
     if (packagesURL[packagesURL.length - 1] != path.sep)
       packagesURL += path.sep;
 
     // if node registry paths was null, bring it back
     this.nodeRegistryPaths = this.nodeRegistryPaths || {};
-    Object.keys(this.nodeRegistryPaths).forEach(function(path) {
-      var registryPath = getRegistryPath(path, self.nodeRegistryPaths[path]);
-      if (registryPath && registryPath.packagesURL + path.sep == curPackagesURL)
-        self.nodeRegistryPaths[path] = packagesURL + registryPath.name + path.sep;
+    Object.keys(this.nodeRegistryPaths).forEach(function(p) {
+      var registryPath = getRegistryPath(p, self.nodeRegistryPaths[p]);
+      self.nodeRegistryPaths[p] = packagesURL + registryPath.name + path.sep;
     });
     // ensure all packageConfig registry paths
     var packageConfigPaths = this.file.getValue(['packageConfigPaths'], 'array');