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Example results not exactly the same as output? #54

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arptier opened this issue Sep 5, 2024 · 0 comments
Open

Example results not exactly the same as output? #54

arptier opened this issue Sep 5, 2024 · 0 comments

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@arptier
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arptier commented Sep 5, 2024

I successfully ran the example code, but the output table is not identical to the one in example_results. I am using the conda installation for IS_mapper version 2.0.2.

This is the example_results:

region  orientation     x       y       gap     call    percent_ID      percent_cov     left_gene       left_description        left_strand       left_distance   right_gene      right_description       right_strand    right_distance  gene_interruption
region_1        F       575454  576331  877     known   99.202  100.0   SSU0539 transposase (pseudogene)        1       210     SSU0542 transposase       1       470     False
region_2        F       592831  593706  875     known   99.197  99.0    SSU0565 MarR family regulatory protein  -1      245     SSU0567 putative transposase      1       459     False
region_3        F       986694  987569  875     known   99.2    100.0   SSU0965 acetyltransferase (GNAT) family protein (pseudogene)    -11172    SSU0967 putative transposase    1       465     False
region_4        F       1440580 1441456 876     known   99.201  100.0   SSU1420 mannose-6-phosphate isomerase   1       216     SSU1423 putative transposase      1       471     False

This is the one from my run:

region  orientation     x       y       gap     call    percent_ID      percent_cov     left_gene       left_description        left_stran                        d       left_distance   right_gene      right_description       right_strand    right_distance  gene_interruption
region_1        F       575456  576317  861     known   99.187  100.0   SSU0539 transposase (pseudogene)        1       212     SSU0542 tr                        ansposase       1       456     False
region_2        F       592841  593705  864     known   99.19   100.0   SSU0565 MarR family regulatory protein  -1      255     SSU0567 pu                        tative transposase      1       458     False
region_3        F       986702  987560  858     known   99.184  100.0   SSU0965 acetyltransferase (GNAT) family protein (pseudogene)    -1                        1164    SSU0967 putative transposase    1       456     False
region_4        F       1440585 1441450 865     known   99.191  100.0   SSU1420 mannose-6-phosphate isomerase   1       221     SSU1423 pu                        tative transposase      1       465     False

Are the differences in the numbers expected and/or inconsequential?

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