Report.tex

\documentclass[12pt,a4paper,bibliography=totocnumbered]{report}
\usepackage[margin=1in]{geometry}
\usepackage[utf8]{inputenc}
\usepackage{amsmath}
\usepackage{graphicx}
\usepackage{listings}
\usepackage{indentfirst}
\graphicspath{{figures/}}
\usepackage{setspace}

\usepackage{etoolbox}
\makeatletter
\patchcmd{\thebibliography}{%
  \chapter*{\bibname}\@mkboth{\MakeUppercase\bibname}{\MakeUppercase\bibname}}{%
  \section{References}}{}{}
\makeatother

\doublespacing

\begin{document}
\setlength{\skip\footins}{1cm}
\renewcommand\thesection{\arabic{section}}
\input{sections/Cover.tex}
\titleGP
\thispagestyle{empty}
This report represents the work of WPI undergraduate students submitted to the faculty as evidence of completion of a degree requirement. WPI routinely publishes these reports on its web site without editorial or peer review.
\clearpage

\setcounter{page}{1}
\pagenumbering{roman}
\tableofcontents
\listoffigures
\listoftables
\clearpage

\input{sections/Abstract.tex}
\newpage
\input{sections/Introduction.tex}
\newpage
%\input{sections/MCarlo.tex}
\newpage
\input{sections/MCNP.tex}
\newpage
\input{sections/Methods.tex}
\newpage
\input{sections/Results.tex}
\newpage
\input{sections/Conclusion.tex}
\newpage
\input{sections/Further.tex}
\newpage
\input{sections/Bibliography.tex}
\newpage
\input{sections/Appendix.tex}
\newpage
\end{document}