diff --git a/utils/convert_nnunet_to_bids.py b/utils/convert_nnunet_to_bids.py index 77cf40f..7d5da60 100644 --- a/utils/convert_nnunet_to_bids.py +++ b/utils/convert_nnunet_to_bids.py @@ -4,14 +4,14 @@ Example of run: - $ python convert_nnunet_to_bids.py --path-conversion-dict /PATH/TO/DICT --path-segmentation-folder /PATH/SEG --path-dataset /PATH/DATASET --mask_name NAME + $ python convert_nnunet_to_bids.py --path-conversion-dict /PATH/TO/DICT --path-segmentation-folder /PATH/SEG --path-dataset /PATH/DATASET --mask-name NAME Arguments: --path-conversion-dict : Path to the json conversion dicionnary to identify corresponding original image to each segmentation. --path-segmentation-folder : Path to the segmentation folder. --path-dataset : Path to the dataset folder. - --mask_name : Name of the folder created at same location as `manual_masks` folder (default: 2d_nnUNet_maks) + --mask-name : Name of the folder created at same location as `manual_masks` folder (default: 2d_nnUNet_maks) Todo: *