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Duplicate entries in sam header #88

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fgypas opened this issue Apr 23, 2018 · 0 comments
Open

Duplicate entries in sam header #88

fgypas opened this issue Apr 23, 2018 · 0 comments

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@fgypas
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fgypas commented Apr 23, 2018 •
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Hi

When I run graphmap as following:
graphmap align -r {input.genome} --gtf {input.gtf} -d {input.reads} -o {output.sam}
the output sam contains duplicate entries in the header.

Foivos
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