environment.yml

# Use this file to set up napari and napari-imagej.
#
# First, install mambaforge:
#
#   https://github.com/conda-forge/miniforge#mambaforge
#
# Then run:
#
#   mamba env create
#   conda activate napari-imagej
#
# It includes the dependencies needed for using napari-imagej but not tools
# for developer-related actions like running automated tests (pytest),
# linting the code (black), and generating the API documentation (sphinx).
# If you want an environment including these tools, use dev-environment.yml.

name: napari-imagej
channels:
  - conda-forge
dependencies:
  - python >= 3.8, < 3.13
  # Project depenencies
  - confuse >= 2.0.0
  - imglyb >= 2.1.0
  - jpype1 >= 1.4.1
  - labeling >= 0.1.12
  - magicgui >= 0.5.1
  - napari >= 0.4.17
  - numpy
  - openjdk=11
  - pandas
  - pyimagej >= 1.4.1
  - scyjava >= 1.8.1
  - xarray < 2024.10.0
  # Version rules to avoid problems
  - qtconsole != 5.4.2
  - typing_extensions != 4.6.0
  # Project from source
  - pip
  - pip:
    - validate-pyproject[all]
    - '.'