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I found that IGV.js 2.15.11 hangs at a specific genomic position with loading bam file. (I opened "inspect" from google chrome browser and found that the browser kept downloading bam file.)
The genomic position is "chr1:67013162" (GRCh38, WGS sample).
That issue also found in other bam files too. (not this bam file only)
The bam file was made with BWA-mem2 (2.2.1).
I can open the bam file with desktop IGV program and samtools tview in terminal.
That position's read depth was around 30-40x.
This issue was not observed in IGV.js 2.15.0.
Thank you!
The text was updated successfully, but these errors were encountered:
Hi, IGV team.
I found that IGV.js 2.15.11 hangs at a specific genomic position with loading bam file. (I opened "inspect" from google chrome browser and found that the browser kept downloading bam file.)
The genomic position is "chr1:67013162" (GRCh38, WGS sample).
That issue also found in other bam files too. (not this bam file only)
The bam file was made with BWA-mem2 (2.2.1).
I can open the bam file with desktop IGV program and samtools tview in terminal.
That position's read depth was around 30-40x.
This issue was not observed in IGV.js 2.15.0.
Thank you!
The text was updated successfully, but these errors were encountered: