doDBErawObj

[mrska]

Hi

You can find doDBErawObj function in my personal folder:
https://github.com/ices-eg/WK_RDBES/tree/master/WKRDB-EST2/subGroup1/funs

If time allows I will add some more checks, stops and warnings to it

Best,
Marta

[rix133]

Testing:

• I cant identify an example expected input and output

I would suggest to run a lint check on a file before each commit. The commad for this file would be:
lintr::lint("./WKRDB-EST2/subGroup1/funs/doDBErawObj.R",linters=lintr::with_defaults(object_name_linter=lintr::object_name_linter(styles = "camelCase")))

Issues identified by running linter:

• Lines should not be more than 80 characters.
• Trailing whitespace is superfluous.
• Use <-, not =, for assignment.
• Variable and function name style should be camelCase.
• Only use double-quotes.
• Do not place spaces around code in parentheses or square brackets.
• Place a space before left parenthesis, except in a function call.
• There should be a space between right parenthesis and an opening curly brace.
• Commas should always have a space after.
• no visible binding for global variable ‘allRequiredTables’
• Commented code should be removed.
• Put spaces around all infix operators.
• Avoid 1:length(...) expressions, use seq_len.
• no visible binding for global variable ‘SL’
• no visible binding for global variable ‘VD’

Issues identified by running devtools::check():

• no visible global function definition for 'choose.dir'
• no visible global function definition for 'read.csv'
• no visible binding for global variable 'allRequiredTables'
• no visible binding for global variable 'SL'
• no visible binding for global variable 'VD'