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setup.py
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setup.py
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#!/usr/bin/env python
# -*- coding: utf-8 -*-
from setuptools import setup, find_packages
long_description = open('README.md').read()
version = '1.0.0'
setup(
name='tome', # This is the name of your PyPI-package.
description='Temperature optima for microorgianisms and enzymes',#package description
long_description=long_description,
version=version, # MAJOR.MINOR.PATCH
author='Gang Li',
author_email='[email protected]',
url='https://github.com/EngqvistLab/Tome',
packages=find_packages(exclude=['test*']), #find folders containing scripts, exclude irrelevant ones
# package_dir={'':'tome'},
install_requires=['pandas','Biopython','numpy','sklearn'],
include_package_data=True,
package_data={'tome':['data/train.csv',
'model/OGT_svr.f',
'model/OGT_svr.pkl',
'external_data/enzyme_ogt_topt.tsv',
'external_data/brenda_sequences_20180109.fasta']},
license='GPLv3+',
classifiers=[
# How mature is this project? Common values are
# 3 - Alpha
# 4 - Beta
# 5 - Production/Stable
'Development Status :: 3 - Alpha',
# Indicate who your project is intended for
'Intended Audience :: Science/Research',
'Topic :: Scientific/Engineering',
# Pick your license as you wish (should match "license" above)
'License :: OSI Approved :: GNU General Public License v3 or later (GPLv3+)',
# Specify the Python versions you support here. In particular, ensure
# that you indicate whether you support Python 2, Python 3 or both.
'Programming Language :: Python :: 2.7',
'Programming Language :: Python :: 3',
'Programming Language :: Python :: 3.2',
'Programming Language :: Python :: 3.3',
'Programming Language :: Python :: 3.4',
'Programming Language :: Python :: 3.5',
'Programming Language :: Python :: 3.6'],
python_requires='>=2', #python version
keywords='tome',
entry_points={
'console_scripts': ['tome = tome.tome:main']
}
)