diff --git a/paimon-core/src/main/java/org/apache/paimon/jdbc/JdbcCatalog.java b/paimon-core/src/main/java/org/apache/paimon/jdbc/JdbcCatalog.java
index c80f8e3a53fc..778bc591fe89 100644
--- a/paimon-core/src/main/java/org/apache/paimon/jdbc/JdbcCatalog.java
+++ b/paimon-core/src/main/java/org/apache/paimon/jdbc/JdbcCatalog.java
@@ -52,6 +52,7 @@
 import java.util.List;
 import java.util.Map;
 import java.util.Optional;
+import java.util.stream.Collectors;
 
 import static org.apache.paimon.jdbc.JdbcCatalogLock.acquireTimeout;
 import static org.apache.paimon.jdbc.JdbcCatalogLock.checkMaxSleep;
@@ -156,7 +157,7 @@ public List<String> listDatabases() {
                         row -> row.getString(JdbcUtils.DATABASE_NAME),
                         JdbcUtils.LIST_ALL_PROPERTY_DATABASES_SQL,
                         catalogKey));
-        return databases;
+        return databases.stream().distinct().collect(Collectors.toList());
     }
 
     @Override
diff --git a/paimon-core/src/test/java/org/apache/paimon/catalog/CatalogTestBase.java b/paimon-core/src/test/java/org/apache/paimon/catalog/CatalogTestBase.java
index 643e1372b614..24eefbcb65d2 100644
--- a/paimon-core/src/test/java/org/apache/paimon/catalog/CatalogTestBase.java
+++ b/paimon-core/src/test/java/org/apache/paimon/catalog/CatalogTestBase.java
@@ -37,6 +37,7 @@
 import org.apache.paimon.shade.guava30.com.google.common.collect.Maps;
 
 import org.junit.jupiter.api.AfterEach;
+import org.junit.jupiter.api.Assertions;
 import org.junit.jupiter.api.BeforeEach;
 import org.junit.jupiter.api.Test;
 import org.junit.jupiter.api.io.TempDir;
@@ -46,6 +47,7 @@
 import java.util.HashMap;
 import java.util.List;
 import java.util.Map;
+import java.util.stream.Collectors;
 
 import static org.apache.paimon.testutils.assertj.PaimonAssertions.anyCauseMatches;
 import static org.assertj.core.api.Assertions.assertThat;
@@ -111,6 +113,18 @@ public void testListDatabases() throws Exception {
         assertThat(databases).contains("db1", "db2", "db3");
     }
 
+    @Test
+    public void testDuplicatedDatabaseAfterCreatingTable() throws Exception {
+        catalog.createDatabase("test_db", false);
+        Identifier identifier = Identifier.create("test_db", "new_table");
+        Schema schema = Schema.newBuilder().column("pk1", DataTypes.INT()).build();
+        catalog.createTable(identifier, schema, false);
+
+        List<String> databases = catalog.listDatabases();
+        List<String> distinctDatabases = databases.stream().distinct().collect(Collectors.toList());
+        Assertions.assertEquals(distinctDatabases.size(), databases.size());
+    }
+
     @Test
     public void testCreateDatabase() throws Exception {
         // Create database creates a new database when it does not exist