From f032df7bac5cadd843136ec7c3b4abcbcc5da99e Mon Sep 17 00:00:00 2001
From: jim-sheldon <5619539+jim-sheldon@users.noreply.github.com>
Date: Mon, 13 May 2024 09:59:24 -0400
Subject: [PATCH] Add adeft workaround install

---
 .github/workflows/stability_tests.yml |  8 +++++++-
 poetry.lock                           | 13 ++++---------
 pyproject.toml                        |  1 -
 3 files changed, 11 insertions(+), 11 deletions(-)

diff --git a/.github/workflows/stability_tests.yml b/.github/workflows/stability_tests.yml
index 3163363..d16d15a 100644
--- a/.github/workflows/stability_tests.yml
+++ b/.github/workflows/stability_tests.yml
@@ -24,8 +24,14 @@ jobs:
       - name: Install Cython dependencies
         run: sudo apt update && sudo apt install -y gcc build-essential python3-dev
 
+      - name: Install setuptools
+        run: python3 -m pip install setuptools --upgrade
+
+      - name: Install adeft
+        run: python3 -m pip install --no-cache-dir --use-deprecated=legacy-resolver git+https://github.com/gyorilab/adeft.git#egg=adeft
+
       - name: Install python dependencies
-        run: python3 -m pip install --user .
+        run: python3 -m pip install .
 
       - name: Run tests
         run: python3 -m pytest -v
diff --git a/poetry.lock b/poetry.lock
index c8b37cb..9cec56b 100644
--- a/poetry.lock
+++ b/poetry.lock
@@ -17,8 +17,9 @@ version = "0.12.3"
 description = "Acromine based Disambiguation of Entities From Text"
 optional = false
 python-versions = ">=3.7"
-files = []
-develop = false
+files = [
+    {file = "adeft-0.12.3.tar.gz", hash = "sha256:3106eb30e5a655caf67db8433b265afa3f292e99bcdf76a720d0c180d2d4b8bb"},
+]
 
 [package.dependencies]
 appdirs = "*"
@@ -30,12 +31,6 @@ scikit-learn = ">=1.0"
 [package.extras]
 test = ["pytest", "pytest-cov"]
 
-[package.source]
-type = "git"
-url = "https://github.com/gyorilab/adeft.git"
-reference = "HEAD"
-resolved_reference = "cbb643d6d4b8378931292295743c67d285419cab"
-
 [[package]]
 name = "aniso8601"
 version = "9.0.1"
@@ -2071,4 +2066,4 @@ watchdog = ["watchdog (>=2.3)"]
 [metadata]
 lock-version = "2.0"
 python-versions = ">=3.10"
-content-hash = "dc9fc6d906c1f13317d4ead31f1120d9c169122f02458d50f43c23a3ffdb7b12"
+content-hash = "5d50cdd0dca15071c6f53e8bcb02c59989367d0c3734c2fa72aa658a50ced80e"
diff --git a/pyproject.toml b/pyproject.toml
index 6071c69..82e4070 100644
--- a/pyproject.toml
+++ b/pyproject.toml
@@ -27,7 +27,6 @@ requests = "^2.31.0"
 click = "^8.1.7"
 addict = "^2.4.0"
 pydantic = "^2.7.1"
-adeft = {git = "https://github.com/gyorilab/adeft.git"}
 
 [tool.poetry.group.test.dependencies]
 pytest = "^8.1.1"