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Question about the data #2

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jsilve24 opened this issue Dec 6, 2024 · 1 comment
Open

Question about the data #2

jsilve24 opened this issue Dec 6, 2024 · 1 comment

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@jsilve24
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jsilve24 commented Dec 6, 2024

Sorry not sure where else to ask this as the data used to be housed here.

In file GALAXY_mOTUs_v25.tsv here https://zenodo.org/records/14243685
The third column should have hteame of a taxa but instead it just lists -1. Which microbe is this? Is it possible to link this to one of the taxa in motus2GTDB?

Thank you!
Justin

@cschu
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cschu commented Dec 8, 2024

"-1" in mOTUs is the "unassigned fraction". This is derived from reads that didn't map against anything.

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