diff --git a/site/4_publications.md b/site/4_publications.md index 4a07a9c4..b7ecc42d 100644 --- a/site/4_publications.md +++ b/site/4_publications.md @@ -47,9 +47,7 @@ Check out PIGEON-FEATHER: [Github repo](https://github.com/glasgowlab/PIGEON-FEA __Daniel C. Pineda Rodriguez__, __Kyle C. Weber__, __Belen Sundberg__, and __Anum Glasgow__. [MAGPIE: an interactive tool for visualizing and analyzing protein-ligand interactions.](https://onlinelibrary.wiley.com/doi/10.1002/pro.5027) *Protein Science*, 33(8), July 2024.

-*Check out MAGPIE on Google CoLab [here](https://colab.research.google.com/github/glasgowlab/MAGPIE/blob/GoogleColab/MAGPIE_COLAB.ipynb).* -
-[Github repo](https://github.com/glasgowlab/MAGPIE/tree/local-version) / [Tutorial](https://magpie-docs.readthedocs.io/en/latest/Introduction.html). +Check out MAGPIE: [Google CoLab](https://colab.research.google.com/github/glasgowlab/MAGPIE/blob/GoogleColab/MAGPIE_COLAB.ipynb) / [Github repo](https://github.com/glasgowlab/MAGPIE/tree/local-version) / [Tutorial](https://magpie-docs.readthedocs.io/en/latest/Introduction.html).


@@ -66,6 +64,7 @@ Stephanie F. Maurina\*, John P. O'Sullivan\*, Geetika Sharma\*, __Daniel C. Pine


+
```{image} ref_figures/lacI.png :height: 200px @@ -73,12 +72,14 @@ Stephanie F. Maurina\*, John P. O'Sullivan\*, Geetika Sharma\*, __Daniel C. Pine :align: right :alt: Allostery in the lac repressor. ``` -
__Anum Glasgow\*__, Helen T. Hobbs, Zion R. Perry, __Malcolm L. Wells__, Susan Marqusee, and Tanja Kortemme. [Ligand-specific changes in conformational flexibility mediate long-range allostery in the *lac* repressor.](https://www.nature.com/articles/s41467-023-36798-1) *Nature Communications* 14(1179), February 2023. (\* corresponding author; these authors jointly advised this work.)

+
+
+ +++ +++ @@ -86,6 +87,7 @@ __Anum Glasgow\*__, Helen T. Hobbs, Zion R. Perry, __Malcolm L. Wells__, Susan M Soumya G. Remesh, Gregory E. Merz, Axel F. Brilot, Un Seng Chio, Alexandrea N. Rizo, Thomas H. Pospiech Jr., Irene Lui, Mathew T. Laurie, Jeff Glasgow, Chau Q. Le, Yun Zhang, Devan Diwanji, Evelyn Hernandez, Jocelyne Lopez, Komal Ishwar Pawar, Sergei Pourmal, Amber M. Smith, Fengbo Zhou, QCRG Structural Biology Consortium, Joseph DeRisi, Tanja Kortemme, Oren S. Rosenberg, __Anum Glasgow__\*, Kevin K. Leung\*, James A. Wells\*, and Kliment A. Verba\*. [Computational pipeline provides mechanistic understanding of Omicron variant of concern neutralizing engineered ACE2 receptor traps.](https://www.cell.com/structure/fulltext/S0969-2126(23)00030-8) *Structure* 31, 1–12, February 2023. (\* co-corresponding authors) +


@@ -94,13 +96,14 @@ Soumya G. Remesh, Gregory E. Merz, Axel F. Brilot, Un Seng Chio, Alexandrea N. R +++ ```{image} ref_figures/spluc.jpg -:height: 130px +:height: 150px :class: bg-primary mb-1 :align: left :alt: Solution-based serology to detect COVID antibodies. ``` Susanna K. Elledge\*, Xin X. Zhou\*, James R. Byrnes, Alexander J. Martinko, Irene Lui, Katarina Pance, Shion A. Lim, Jeff E. Glasgow, __Anum A. Glasgow__, Keirstinne Turcios, Nikita S. Iyer, Leonel Torres, Michael J. Peluso, Timothy J. Henrich, Taia T. Wang, Cristina M. Tato, Kevin K. Leung, Bryan Greenhouse, and James A. Wells. [Engineering luminescent biosensors for point-of-care SARS-CoV-2 antibody detection.](https://www.doi.org/10.1038/s41587-021-00878-8) *Nature Biotechnology*, 39(8):928–935, August 2021. (\* co-first authors) +


@@ -110,6 +113,7 @@ Susanna K. Elledge\*, Xin X. Zhou\*, James R. Byrnes, Alexander J. Martinko, Ire Jeff Glasgow\*, __Anum Glasgow__\*, Tanja Kortemme and James A. Wells, [Reply to Liu *et al.*: Specific mutations matter in specificity and catalysis in ACE2.](https://www.pnas.org/doi/full/10.1073/pnas.2024450118) *Proceedings of the National Academy of Sciences*, 118(15) e2024450118, April 2021. (\* co-first authors) +


@@ -124,6 +128,7 @@ Jeff Glasgow\*, __Anum Glasgow__\*, Tanja Kortemme and James A. Wells, [Reply to :alt: Engineering SARS-CoV-2 neutralizing receptor traps. ``` +