Update ChEBI pH 7.3 mapping #123
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| name: Update ChEBI pH 7.3 mapping | |
| on: | |
| workflow_dispatch: | |
| schedule: | |
| - cron: '0 4 * * 0' | |
| jobs: | |
| update: | |
| runs-on: ubuntu-latest | |
| container: obolibrary/odkfull:${{ vars.ODK_VERSION }} | |
| steps: | |
| - name: Checkout repo | |
| uses: actions/checkout@v4 | |
| - name: Work around https://github.com/peter-evans/create-pull-request/issues/1170 | |
| run: git config --global --add safe.directory "$GITHUB_WORKSPACE" | |
| - name: Update ChEBI pH 7.3 mapping | |
| run: cd src/ontology && rm ../biochebi/chebi_pH7_3_mapping.tsv && make ../biochebi/chebi_pH7_3_mapping.tsv && cd ../.. | |
| - name: Create PR | |
| uses: peter-evans/create-pull-request@v5 | |
| with: | |
| title: Update ChEBI pH 7.3 mapping | |
| branch: update-chebi-pH-7-3 | |
| token: ${{ secrets.PR_ACTION_TOKEN }} |