Batch size for many input files

[Fazel-AVB]

Hi, thank you for developing this useful tool.
I have so many genomes (> 100k) along with their gbk files, and I want to annotate them via Phold. Would a large --batch_size (e.g. 128) help process files faster? Since in the documentation, you have mentioned that a batch size of 1 is usually faster!
And, in general, should I combine all of my gbk files into a single one as input, or can I give different gbk files in parallel to the phold predict?

bw