v 0.1.11

Adds VFDB database for identification of virulence factors and CARD database for identification of AMR genes.

v 0.1.10

Fixes bugs in the genbank output

v 0.1.9

Fixes 2 bugs

1. Pharokka would crash if mmseqs failed to find any hits (for some very small phages).
2. Improved tRNA parsing from Aragorn.

v 0.1.8

Minor release to fix issues with install_database.py and also add locustag into the .tbl output

v0.1.7

• Removes hh-suite dependency to reduce run-time (redundant with e-value option).
• Adds e-value option for passing into mmseqs2.
• Adds CRISPR detection using MinCED.
• Adds tmRNA detection using Aragorn.
• Adds CDS coding density to _length_gc_cds_density.tsv.

v0.1.6

Merge pull request #147 from gbouras13/mini2

v1.0.6