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According to the FCS 3.1 specification (and probably older ones, too), logarithmic data channels can be saved in linearized form with $PnE specifying the logarithmic range and minimal value.
Currently the library does not transform these values into logarithmic form for later transformations.
The text was updated successfully, but these errors were encountered:
Hi @xiamaz - for what it's worth, I've just implemented this functionality in my project, cytoflow, which builds on fcsparser. It's a pretty straightforward transformation to do once you've sucked the data in with fcsparser -- see commit cytoflow/cytoflow@039f9ab for details.
According to the FCS 3.1 specification (and probably older ones, too), logarithmic data channels can be saved in linearized form with
$PnE
specifying the logarithmic range and minimal value.Currently the library does not transform these values into logarithmic form for later transformations.
The text was updated successfully, but these errors were encountered: