validate_hub_config.yml

name: Validate Hub Configuration

on:
  workflow_dispatch:

  
jobs:
  validate-hub_config_job:
    runs-on: ubuntu-latest
    steps:
    - name: Checkout repository
      uses: actions/checkout@v3


    - name: checkout data repo
      uses: actions/checkout@v3
      with:
        token: ${{ secrets.GITHUB_TOKEN }}
        repository: 'european-modelling-hubs/RespiCompass'
        ref: 'main'
        path: './repo/'

    # TEST ONLY -----------------------------------
    - uses: r-lib/actions/setup-r@v2
      with:
        install-r: false
        use-public-rspm: true

    - name: Install system dependencies
      run: |
        sudo apt-get update
        sudo apt-get install libcurl4-openssl-dev libv8-dev libudunits2-dev libgdal-dev

    # install test dep
    - uses: r-lib/actions/setup-r-dependencies@v2
      with:
        packages: hubverse-org/hubAdmin, any::sessioninfo


    # validate hub configurations
    - name: Run hub config validations
      run: |
        library("hubAdmin")
        v <- hubAdmin::validate_hub_config(hub_path = "./repo",  schema_version = "latest")
        view_config_val_errors(v)
      shell: Rscript {0}

    - name: trace
      run: echo "Validation completed"