solocall_QAinternal_psychophys-files_listing

#! /bin/bash

clear

echo -en "Processing..."

# Command
echo "Count psychophys files:SubjID:SubjID match with that in filename:Scandate match with that in filename:Date in file name:Time in file name:Psychophys output file name" > /Volumes/DroboPro/project_FM_Gracely/data_analysis_mri/study_data/QA_mri_files/psychophys_stimpresentation/psychophys_outputfiles_count2.txt

for item in `ls`
do
	count_files=1

	subj_scandate=`echo ${item} | awk -F_ '{print $2}'`

	output_files=`ls ${item}/psychophys_software_output/raw_data/*.txt | awk -F/ '{print $NF}'`

	for item2 in ${output_files}
	do
		counter_files=`printf "%02d" ${count_files}`

		filename_date_dayyear=`echo ${item2} | awk -F_ '{print $(NF-2)}' | awk -F"-" '{print $2"-"$3}'`

		filename_date_monthnumber=`echo ${item2} | awk -F_ '{print $(NF-2)}' | awk -F- '{print $1}'`

		count_month=1

		month_list="JAN FEB MAR APR MAY JUN JUL AUG SEP OCT NOV DEC"

		for month in ${month_list}
		do
			if [ ${filename_date_monthnumber} = ${count_month} ]
			then
				filename_date_monthname=${month}

				break
			else
				((count_month++))
			fi
		done

		filename_date=`gdate -d "${filename_date_monthname}-${filename_date_dayyear}" +%Y%m%d`

		filename_time=`echo ${item2} | awk -F_ '{print $(NF-1),$NF}' | sed 's/.txt//'`

		subjID_file=`echo ${item2} | awk -F_ '{print $1"_"$2}'`

		if [ ${item} = ${subjID_file} ]
		then
			ID_match=MATCH
		else
			ID_match=DIFFER
		fi

		if [ ${subj_scandate} = ${filename_date} ]
		then
			scandate_match=MATCH
		else
			scandate_match=DIFFER
		fi

		echo -e "${counter_files}:${item}:${ID_match}:${scandate_match}:${filename_date}:${filename_time}:${item2}" >> /Volumes/DroboPro/project_FM_Gracely/data_analysis_mri/study_data/QA_mri_files/psychophys_stimpresentation/psychophys_outputfiles_count2.txt
		((count_files++))
	done
done

echo