Add lintr continuous integration

[Bisaloo]

This is on hold until #93 is merged since it will already remove a bunch of lints.

Please disregard the failing check. It is expected and innocuous.

[github-actions]

⚠️ WARNING ⚠️

This pull request contains a mix of workflow files and regular files. This could be malicious. No preview will be created.

regular files:

• .lintr
• episodes/compare-interventions.Rmd
• episodes/model-choices.Rmd
• episodes/modelling-interventions.Rmd
• episodes/simulating-transmission.Rmd
• episodes/template.Rmd
• renv/profiles/lesson-requirements/renv.lock

workflow files:

• .github/workflows/lint.yaml

[avallecam]

Thank you for adding {lintr} to this repo! It is a polite way to police a homogeneous writing aesthetic. I liked the homogenization of require/library and the isolation of argument object names in different lines.

Thanks to this PR, I also found the need to open #108 , so the nolint will be displaced at some moment after emerging other PRs.

I asked some questions that probably require some changes before merging.

[avallecam]

⚠️ WARNING ⚠️

This pull request contains a mix of workflow files and regular files. This could be malicious. No preview will be created.

One additional question. About the warning in the second message of this PR, should we isolate the workflow and regular file edits in different PRs?

[Bisaloo]

One additional question. About #96 (comment), should we isolate the workflow and regular file edits in different PRs?

It's fine in this specific case.

This warning is here because there is a risk someone could steal private GitHub info from of our organization in such a PR. This security element is good in general. In this specific case, you don't have anything to worry about since I already have access to all our of organization settings.

[avallecam]

I agree with the recent updates. Ready to merge! 🚀

[avallecam]

Sorry, I want to add the brief edit suggested in #108

[avallecam]

if appropriate, these suggested changes can help to solve #108

[avallecam]

thank you for the latest updates! ready to merge 🚀