Use incidence2 + MASS directly instead of i2extras #52
Workflow file for this run
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# Workflow derived from https://github.com/r-lib/actions/tree/v2/examples | |
# Need help debugging build failures? Start at https://github.com/r-lib/actions#where-to-find-help | |
on: | |
workflow_dispatch: | |
pull_request: | |
branches: [main, master] | |
paths: | |
- 'inst/rmarkdown/templates/**' | |
name: test reports | |
concurrency: | |
group: ${{ github.workflow }}-${{ github.ref }} | |
cancel-in-progress: true | |
jobs: | |
test-reports: | |
runs-on: ubuntu-latest | |
env: | |
GITHUB_PAT: ${{ secrets.GITHUB_TOKEN }} | |
steps: | |
- uses: actions/checkout@v3 | |
- uses: r-lib/actions/setup-pandoc@v2 | |
- uses: r-lib/actions/setup-r@v2 | |
with: | |
use-public-rspm: true | |
- uses: r-lib/actions/setup-r-dependencies@v2 | |
with: | |
# it would be good to automatically identify system dependencies in the future | |
extra-packages: | | |
local::. | |
sodium, | |
curl | |
- name: Test report rendering | |
run: | | |
library(episoap) | |
for (tp in list_templates()) { | |
rmarkdown::render( | |
system.file("rmarkdown", "templates", tp, "skeleton", "skeleton.Rmd", | |
package = "episoap" | |
), | |
output_file = tempfile(), | |
quiet = TRUE | |
) | |
} | |
shell: Rscript {0} |