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Issues with data files #74

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sbfnk opened this issue Nov 15, 2022 · 0 comments
Open
5 tasks

Issues with data files #74

sbfnk opened this issue Nov 15, 2022 · 0 comments

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@sbfnk
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sbfnk commented Nov 15, 2022

This is a space to gather issues with the data files to help the maintainers of the Social contact data community on Zenodo keep track. If you spot any issue please add a comment below.

  • CoMix social contact data (Belgium ) (https://doi.org/10.5281/zenodo.4035001) contains duplicate files names only differing by capitalisation. Suggested fix: remove obsolete files
  • CoMix social contact data (Belgium ) (https://doi.org/10.5281/zenodo.4035001) contains a file comix_be_hh_extra.csv with duplicate rows, preventing it from being merged. Suggested fix: deduplicate the file (e.g. by running unique(df))
  • CoMix 2.0 social contact data (https://doi.org/10.5281/zenodo.7014555) does not contain information on the country of participants (get_survey() fails on CoMiX 2.0 #53). Suggested fix: add a country column
  • Social contact data for Zimbabwe (https://doi.org/10.5281/zenodo.1127693) has a household file 2017_melegaro_zimbabwe_hh_common.csv that seems to contain the information twice and therefore cannot be associated with the survey uniquely. Suggested fix: deduplicate the file (e.g. by running unique(df) which reduces the number of rows by half)
  • CoMix social contact data (UK) (https://doi.org/10.5281/zenodo.4905745) has a stray column X in the files comix_uk_hh_common.csv and comix_uk_participant_common.csv which is not matching and prevents them from being merged. Suggested fix: remove the X column from these two files.
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