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old-ci.yml
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name: old-ci
# Controls when the workflow will run
on:
# Trigger the workflow on all pushes, except on tag creation
push:
branches:
- '**'
tags-ignore:
- '**'
# Trigger the workflow on all pull requests
pull_request: ~
# Allow workflow to be dispatched on demand
workflow_dispatch: ~
env:
INSTALL_TOOLS: ${{ github.workspace }}/install-tools
CTEST_PARALLEL_LEVEL: 1
CACHE_SUFFIX: v1
jobs:
old-ci:
name: old-ci
strategy:
fail-fast: false # false: try to complete all jobs
matrix:
build_type: [Release]
name:
- linux gnu-10
- linux gnu-12
- linux clang-14
include:
- name: linux gnu-10
os: ubuntu-20.04
compiler: gnu-10
compiler_cc: gcc-10
compiler_cxx: g++-10
compiler_fc: gfortran-10
caching: true
- name: linux gnu-12
os: ubuntu-22.04
compiler: gnu-12
compiler_cc: gcc-12
compiler_cxx: g++-12
compiler_fc: gfortran-12
caching: true
cmake_options: -DENABLE_OMP_CXX=OFF
- name: linux clang-14
os: ubuntu-22.04
compiler: clang-14
compiler_cc: clang-14
compiler_cxx: clang++-14
compiler_fc: gfortran-12
caching: true
runs-on: ${{ matrix.os }}
steps:
- name: Checkout Repository
uses: actions/checkout@v4
- name: Set up Homebrew
id: set-up-homebrew
uses: Homebrew/actions/setup-homebrew@master
- name: Environment
run: |
echo "DEPS_DIR=${{ runner.temp }}/deps" >> $GITHUB_ENV
echo "CC=${{ matrix.compiler_cc }}" >> $GITHUB_ENV
echo "CXX=${{ matrix.compiler_cxx }}" >> $GITHUB_ENV
echo "FC=${{ matrix.compiler_fc }}" >> $GITHUB_ENV
if [[ "${{ matrix.os }}" =~ ^macos ]]; then
export HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK=1
export HOMEBREW_NO_AUTO_UPDATE=1
export HOMEBREW_NO_INSTALL_CLEANUP=1
echo "HOMEBREW_NO_INSTALLED_DEPENDENTS_CHECK=1" >> $GITHUB_ENV
echo "HOMEBREW_NO_AUTO_UPDATE=1" >> $GITHUB_ENV
echo "HOMEBREW_NO_INSTALL_CLEANUP=1" >> $GITHUB_ENV
brew install ninja
else
sudo apt-get update
sudo apt-get install ninja-build
fi
printenv
- name: Cache Dependencies
# There seems to be a problem with cached NVHPC dependencies, leading to SIGILL perhaps due to slightly different architectures
if: matrix.caching
id: deps-cache
uses: pat-s/[email protected]
with:
path: ${{ env.DEPS_DIR }}
key: deps-${{ matrix.os }}-${{ matrix.compiler }}-v1
- name: Install Intel oneAPI compiler
if: contains( matrix.compiler, 'intel' )
run: |
${INSTALL_TOOLS}/install-intel-oneapi.sh
source /opt/intel/oneapi/setvars.sh
printenv >> $GITHUB_ENV
echo "CACHE_SUFFIX=$(icc -dumpversion)" >> $GITHUB_ENV
- name: Install MPI
shell: bash -eux {0}
run: |
FCFLAGS=-fPIC CFLAGS=-fPIC FFLAGS=-fPIC ${INSTALL_TOOLS}/install-mpi.sh --mpi openmpi --prefix ${DEPS_DIR}/openmpi
[ -f ${DEPS_DIR}/openmpi/env.sh ] && source ${DEPS_DIR}/openmpi/env.sh
[ -z ${MPI_HOME+x} ] || echo "MPI_HOME=${MPI_HOME}" >> $GITHUB_ENV
- name: Install FFTW
shell: bash -eux {0}
run: |
${INSTALL_TOOLS}/install-fftw.sh --version 3.3.10 --prefix ${DEPS_DIR}/fftw
echo "FFTW_ROOT=${DEPS_DIR}/fftw" >> $GITHUB_ENV
- name: Set Build & Test Environment
run: |
# Only add --oversubscribe arg for openmpi
[ -z ${I_MPI_ROOT+x} ] && echo "MPI_ARGS=--oversubscribe" >> $GITHUB_ENV
# Add mpirun to path for testing
[ -z ${MPI_HOME+x} ] || echo "${MPI_HOME}/bin" >> $GITHUB_PATH
- name: Build & Test
id: build-test
uses: ecmwf-actions/build-package@v2
with:
# lcov fails for gcc-12, re-enable self_coverage later
self_coverage: false
force_build: true
cache_suffix: '${{ matrix.build_type }}-${{ env.CACHE_SUFFIX }}'
recreate_cache: ${{ matrix.caching == false }}
dependencies: |
ecmwf/ecbuild
ecmwf/eckit
ecmwf/fckit
MathisRosenhauer/libaec@master
ecmwf/eccodes
ecmwf/metkit
ecmwf/fdb
ecmwf/atlas
ecmwf/atlas-orca
dependency_branch: develop
dependency_cmake_options: |
ecmwf/eckit: "-G Ninja -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DENABLE_TESTS=OFF -DENABLE_ECKIT_SQL=OFF"
ecmwf/fckit: "-G Ninja -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DENABLE_TESTS=OFF"
ecmwf/atlas: "-G Ninja -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DENABLE_TESTS=OFF -DATLAS_BITS_LOCAL=32 ${{ matrix.cmake_options }}"
cmake_options: '-G Ninja -DCMAKE_BUILD_TYPE=${{ matrix.build_type }} -DENABLE_LEGACY_IFSIO=ON ${{ matrix.cmake_options }}'
ctest_options: '${{ matrix.ctest_options }}'
# test pymultio
- name: Setup python env
uses: actions/setup-python@v4
with:
python-version: '3.11'
- name: Install python deps
run: |
python -m pip install --upgrade pip
python -m pip install black flake8 isort pytest pytest-cov pyeccodes numpy findlibs
python -m pip install -r pymultio/requirements.txt
- name: Check isort
run: isort --check pymultio
- name: Install Intel oneAPI compiler
if: contains( matrix.compiler, 'intel' )
run: |
${INSTALL_TOOLS}/install-intel-oneapi.sh
source /opt/intel/oneapi/setvars.sh
printenv >> $GITHUB_ENV
echo "CACHE_SUFFIX=$CC-$($CC -dumpversion)" >> $GITHUB_ENV
#- name: Check black
# run: black --check pymultio
# - name: Check flake8
# run: flake8 pymultio
- name: Verify Source Distribution
shell: bash -eux {0}
run: |
cd pymultio
python setup.py sdist
python -m pip install dist/*
- name: Run pytest
#env:
# LD_LIBRARY_PATH: ${{ steps.build-test.outputs.lib_path }}
shell: bash -eux {0}
run: |
cd pymultio
if [[ "${{ matrix.os }}" =~ ^macos ]]; then
LD_LIBRARY_PATH=${{ steps.build-test.outputs.lib_path }} python -m pytest --cov=./ --cov-report=xml
else
LD_LIBRARY_PATH=${{ steps.build-test.outputs.lib_path }}:$LD_LIBRARY_PATH python -m pytest --cov=./ --cov-report=xml
fi
python -m coverage report