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Question and context
Based on this documentation and discussion here, my understanding is that report() should return a little write-up summarising the results of an estimate_contrasts object. However, when I try this with my fitted lmer model, I just get generic descriptive statistics. The same thing happens for me if I run the example from the documentation:
library(modelbased)
model <- lm(Sepal.Width ~ Species, data = iris)
contr <- estimate_contrasts(model)
report(contr)
The expected response (according to the documentation):
#> The marginal contrasts analysis suggests the following. The difference between
#> setosa and versicolor is positive and statistically significant (difference =
#> 0.66, 95% CI [ 0.49, 0.82], t(147) = 9.69, p < .001). The difference between
#> setosa and virginica is positive and statistically significant (difference =
#> 0.45, 95% CI [ 0.29, 0.62], t(147) = 6.68, p < .001). The difference between
#> versicolor and virginica is negative and statistically significant (difference
#> = -0.20, 95% CI [-0.37, -0.04], t(147) = -3.00, p = 0.003)
What I get:
The data contains 3 observations of the following 9 variables:
- Level1: 2 entries, such as setosa (n = 2); versicolor (n = 1); NA (0 missing)
- Level2: 2 entries, such as virginica (n = 2); versicolor (n = 1); NA (0 missing)
- Difference: n = 3, Mean = 0.30, SD = 0.45, Median = 0.45, MAD = 0.30, range: [-0.20, 0.66], Skewness = -1.34, Kurtosis = -1.50, 0 missing
- CI_low: n = 3, Mean = 0.14, SD = 0.45, Median = 0.29, MAD = 0.30, range: [-0.37, 0.49], Skewness = -1.34, Kurtosis = -1.50, 0 missing
- CI_high: n = 3, Mean = 0.47, SD = 0.45, Median = 0.62, MAD = 0.30, range: [-0.04, 0.82], Skewness = -1.34, Kurtosis = -1.50, 0 missing
- SE: n = 3, Mean = 0.07, SD = 1.70e-17, Median = 0.07, MAD = 0.00, range: [0.07, 0.07], Skewness = 0.82, Kurtosis = -2.00, 0 missing
- df: n = 3, Mean = 147.00, SD = 0.00, Median = 147.00, MAD = 0.00, range: [147, 147], Skewness = , Kurtosis = , 0 missing
- t: n = 3, Mean = 4.46, SD = 6.63, Median = 6.68, MAD = 4.45, range: [-3.00, 9.69], Skewness = -1.34, Kurtosis = -1.50, 0 missing
- p: n = 3, Mean = 1.05e-03, SD = 1.82e-03, Median = 9.08e-10, MAD = 1.35e-09, range: [5.50e-17, 3.15e-03], Skewness = 1.73, Kurtosis =
-1.50, 0 missing
I generated above using report 0.5.7 and modelbased 0.8.6 with R version 4.3.1 on Windows 10.
The text was updated successfully, but these errors were encountered:
packageVersion("report")
#> [1] '0.5.9'
packageVersion("modelbased")
#> [1] '0.8.8'
library(modelbased)
library(report)
model<- lm(Sepal.Width~Species, data=iris)
contr<- estimate_contrasts(model)
#> No variable was specified for contrast estimation. Selecting `contrast =#> "#> Species#> "`.
report(contr)
#> The marginal contrasts analysis suggests the following. The difference between#> setosa and versicolor is positive and statistically significant (difference =#> 0.66, 95% CI [ 0.49, 0.82], t(147) = 9.69, p < .001). The difference between#> setosa and virginica is positive and statistically significant (difference =#> 0.45, 95% CI [ 0.29, 0.62], t(147) = 6.68, p < .001). The difference between#> versicolor and virginica is negative and statistically significant (difference#> = -0.20, 95% CI [-0.37, -0.04], t(147) = -3.00, p = 0.003)
Can you try updating report to the latest version? I just checked in the link to the other discussion you linked and support for estimate_contrast in report was only officially added from version 0.5.8, so the results you had was the previous behaviour before support was added.
Question and context
Based on this documentation and discussion here, my understanding is that
report()
should return a little write-up summarising the results of anestimate_contrasts
object. However, when I try this with my fitted lmer model, I just get generic descriptive statistics. The same thing happens for me if I run the example from the documentation:The expected response (according to the documentation):
What I get:
I generated above using report 0.5.7 and modelbased 0.8.6 with R version 4.3.1 on Windows 10.
The text was updated successfully, but these errors were encountered: