From 7a4108763d9ee7495465249aa441da06bdf3c083 Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Wed, 6 Nov 2024 16:49:52 +0100 Subject: [PATCH 01/13] Add easyconfig Bio-DB-HTS-3.01-GCC-13.2.0.eb --- .../Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb | 32 +++++++++++++++++++ 1 file changed, 32 insertions(+) create mode 100644 easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb diff --git a/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb new file mode 100644 index 00000000000..6e9a29bd4a0 --- /dev/null +++ b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb @@ -0,0 +1,32 @@ +easyblock = 'PerlModule' + +name = 'Bio-DB-HTS' +version = '3.01' + +homepage = 'https://metacpan.org/release/Bio-DB-HTS' +description = "Read files using HTSlib including BAM/CRAM, Tabix and BCF database files" + +toolchain = {'name': 'GCC', 'version': '13.2.0'} + +source_urls = ['https://cpan.metacpan.org/authors/id/A/AV/AVULLO/'] +sources = ['Bio-DB-HTS-%(version)s.tar.gz'] +checksums = ['12a6bc1f579513cac8b9167cce4e363655cc8eba26b7d9fe1170dfe95e044f42'] + +builddependencies = [('pkgconf', '1.9.3')] + +dependencies = [ + ('Perl', '5.36.0'), + ('BioPerl', '1.7.8'), + ('HTSlib', '1.17'), +] + +preconfigopts = "env HTSLIB_DIR=$EBROOTHTSLIB" + +options = {'modulename': 'Bio::DB::HTS'} + +sanity_check_paths = { + 'files': [], + 'dirs': ['lib/perl5/site_perl/%(perlver)s', 'man/man3'], +} + +moduleclass = 'bio' From 6b6d86e58241ce9cdfe981f1ac6fce7392adcbb7 Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Wed, 6 Nov 2024 16:54:46 +0100 Subject: [PATCH 02/13] Upgrade Perl and HTSlib versions in Bio-DB-HTS-3.01-GCC-13.2.0.eb --- .../easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb | 4 ++-- 1 file changed, 2 insertions(+), 2 deletions(-) diff --git a/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb index 6e9a29bd4a0..bbbb28305d9 100644 --- a/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb +++ b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb @@ -15,9 +15,9 @@ checksums = ['12a6bc1f579513cac8b9167cce4e363655cc8eba26b7d9fe1170dfe95e044f42'] builddependencies = [('pkgconf', '1.9.3')] dependencies = [ - ('Perl', '5.36.0'), + ('Perl', '5.38.0'), ('BioPerl', '1.7.8'), - ('HTSlib', '1.17'), + ('HTSlib', '1.19.1'), ] preconfigopts = "env HTSLIB_DIR=$EBROOTHTSLIB" From e0137012d40deb5261b34d68f0f19dee5d10991c Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Wed, 6 Nov 2024 16:57:52 +0100 Subject: [PATCH 03/13] Upgrade pkgconf version in Bio-DB-HTS-3.01-GCC-13.2.0.eb --- .../easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb index bbbb28305d9..d3a20b14af2 100644 --- a/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb +++ b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb @@ -12,7 +12,7 @@ source_urls = ['https://cpan.metacpan.org/authors/id/A/AV/AVULLO/'] sources = ['Bio-DB-HTS-%(version)s.tar.gz'] checksums = ['12a6bc1f579513cac8b9167cce4e363655cc8eba26b7d9fe1170dfe95e044f42'] -builddependencies = [('pkgconf', '1.9.3')] +builddependencies = [('pkgconf', '2.2.0')] dependencies = [ ('Perl', '5.38.0'), From 97980dfc62ea273b2fa4576a6a1fb973fcc4d1d2 Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Wed, 6 Nov 2024 17:02:25 +0100 Subject: [PATCH 04/13] Add easyconfig BioPerl-1.7.8-GCCcore-13.2.0.eb --- .../b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb | 58 +++++++++++++++++++ 1 file changed, 58 insertions(+) create mode 100644 easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb diff --git a/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb b/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb new file mode 100644 index 00000000000..88668c50554 --- /dev/null +++ b/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb @@ -0,0 +1,58 @@ +# easybuild easyconfig +# +# John Dey jfdey@fredhutch.org +# +# Fred Hutchinson Cancer Research Center +# Thomas Eylenbosch - Gluo NV + +easyblock = 'Bundle' + +name = 'BioPerl' +version = '1.7.8' + +homepage = 'https://bioperl.org/' +description = """Bioperl is the product of a community effort to produce Perl code which is useful in biology. + Examples include Sequence objects, Alignment objects and database searching objects.""" + +toolchain = {'name': 'GCCcore', 'version': '13.2.0'} + +builddependencies = [('binutils', '2.42')] + +dependencies = [ + ('Perl', '5.38.2'), + ('Perl-bundle-CPAN', '5.38.2'), + ('XML-LibXML', '2.0210'), + ('DB_File', '1.859'), +] + +exts_defaultclass = 'PerlModule' +exts_filter = ("perldoc -lm %(ext_name)s ", "") + +exts_list = [ + ('XML::Writer', '0.900', { + 'source_tmpl': 'XML-Writer-%(version)s.tar.gz', + 'source_urls': ['https://cpan.metacpan.org/authors/id/J/JO/JOSEPHW'], + 'checksums': ['73c8f5bd3ecf2b350f4adae6d6676d52e08ecc2d7df4a9f089fa68360d400d1f'], + }), + (name, version, { + 'source_tmpl': '%(name)s-%(version)s.tar.gz', + 'source_urls': ['https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/'], + 'checksums': ['c490a3be7715ea6e4305efd9710e5edab82dabc55fd786b6505b550a30d71738'], + }), + ('Bio::Procedural', '1.7.4', { + 'source_tmpl': 'Bio-Procedural-%(version)s.tar.gz', + 'source_urls': ['https://cpan.metacpan.org/authors/id/C/CJ/CJFIELDS/'], + 'checksums': ['d2bd9cfbb091eee2d80ed6cf812ac3813b1c8a1aaca20671037f5f225d31d1da'], + }), +] + +modextrapaths = { + 'PERL5LIB': 'lib/perl5/site_perl/%(perlver)s/', +} + +sanity_check_paths = { + 'files': [], + 'dirs': ['bin', 'lib/perl5/site_perl/%(perlver)s/Bio'], +} + +moduleclass = 'bio' From 02d8aec482a466911557b4bed4e1dde3bf326edd Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Wed, 6 Nov 2024 17:09:48 +0100 Subject: [PATCH 05/13] Add easyconfig d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb and adjust some dependencies --- .../b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb | 4 +-- .../d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb | 31 +++++++++++++++++++ 2 files changed, 33 insertions(+), 2 deletions(-) create mode 100644 easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb diff --git a/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb b/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb index 88668c50554..3d554f57025 100644 --- a/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb +++ b/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb @@ -19,8 +19,8 @@ toolchain = {'name': 'GCCcore', 'version': '13.2.0'} builddependencies = [('binutils', '2.42')] dependencies = [ - ('Perl', '5.38.2'), - ('Perl-bundle-CPAN', '5.38.2'), + ('Perl', '5.38.0'), + ('Perl-bundle-CPAN', '5.38.0'), ('XML-LibXML', '2.0210'), ('DB_File', '1.859'), ] diff --git a/easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb b/easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb new file mode 100644 index 00000000000..927f31cd5b2 --- /dev/null +++ b/easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb @@ -0,0 +1,31 @@ +easyblock = 'PerlModule' + +name = 'DB_File' +version = '1.859' + +homepage = 'https://perldoc.perl.org/DB_File.html' +description = """Perl5 access to Berkeley DB version 1.x.""" + +toolchain = {'name': 'GCCcore', 'version': '13.2.0'} + +source_urls = ['https://www.cpan.org/modules/by-module/DB_File/PMQS'] +sources = [SOURCE_TAR_GZ] +checksums = ['5674e0d2cd0b060c4d1253670ea022c64d842a55257f9eb8edb19c0f53e2565c'] + +builddependencies = [ + ('binutils', '2.42'), +] + +dependencies = [ + ('Perl', '5.38.0'), + ('DB', '18.1.40'), +] + +preconfigopts = 'env DB_FILE_INCLUDE="$EBROOTDB/include" DB_FILE_LIB="$EBROOTDB/lib" ' + +sanity_check_paths = { + 'files': ['lib/perl5/site_perl/%(perlver)s/%(arch)s-linux-thread-multi/DB_File.pm'], + 'dirs': [], +} + +moduleclass = 'data' From f2791ed3667e3fe4a08e8e1e266e416afcb7c011 Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Wed, 6 Nov 2024 17:15:34 +0100 Subject: [PATCH 06/13] Add easyconfig DB-18.1.40-GCCcore-13.2.0.eb --- .../d/DB/DB-18.1.40-GCCcore-13.2.0.eb | 33 +++++++++++++++++++ 1 file changed, 33 insertions(+) create mode 100644 easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb diff --git a/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb b/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb new file mode 100644 index 00000000000..88109c6d3bf --- /dev/null +++ b/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb @@ -0,0 +1,33 @@ +name = 'DB' +version = '18.1.40' + +homepage = 'https://www.oracle.com/technetwork/products/berkeleydb' + +description = """Berkeley DB enables the development of custom data management + solutions, without the overhead traditionally associated with such custom + projects.""" + +toolchain = {'name': 'GCCcore', 'version': '13.2.0'} + +# use http to allow auto-downloading... +source_urls = ['http://download.oracle.com/berkeley-db/'] +sources = [SOURCELOWER_TAR_GZ] +patches = ['%(name)s-%(version)s_fix_doc_install.patch'] +checksums = [ + '0cecb2ef0c67b166de93732769abdeba0555086d51de1090df325e18ee8da9c8', # db-18.1.40.tar.gz + '441f48568156f72f02a8662998d293cc7edad687604b4f8af722f21c6db2a52d', # DB-18.1.40_fix_doc_install.patch +] + +builddependencies = [('binutils', '2.42')] + +dependencies = [('OpenSSL', '3', '', SYSTEM)] + +sanity_check_paths = { + 'files': ['bin/db_%s' % x for x in ['archive', 'checkpoint', 'convert', 'deadlock', 'dump', 'hotbackup', + 'load', 'log_verify', 'printlog', 'recover', 'replicate', 'stat', + 'tuner', 'upgrade', 'verify']] + + ['include/db.h', 'lib/libdb.a', 'lib/libdb.%s' % SHLIB_EXT], + 'dirs': [], +} + +moduleclass = 'tools' From ad8a4641235acffe573a79e1cf0f63fee121a1cb Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Thu, 7 Nov 2024 15:46:19 +0100 Subject: [PATCH 07/13] Disable two tests in Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb that fail on Debian systems --- .../Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb | 2 ++ 1 file changed, 2 insertions(+) diff --git a/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb b/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb index 35ab629e89e..860af105703 100644 --- a/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb +++ b/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb @@ -2061,11 +2061,13 @@ exts_list = [ 'checksums': ['3973ebdc44682c9c15c776f66e8be242cb4ff1dd52caf43ff446b74d4dccca06'], }), ('Sys::Info::Driver::Linux::Device::CPU', '0.7905', { + 'runtest': False, # Fragile tests, specifically it fails on Debian systems 'source_tmpl': 'Sys-Info-Driver-Linux-%(version)s.tar.gz', 'source_urls': ['https://cpan.metacpan.org/authors/id/B/BU/BURAK'], 'checksums': ['899c329bd3508ec5849ad0e5dadfa7c3679bbacaea9dda12404a7893032e8b7b'], }), ('Sys::Info', '0.7811', { + 'runtest': False, # Fragile tests, specifically it fails on Debian systems 'source_tmpl': 'Sys-Info-%(version)s.tar.gz', 'source_urls': ['https://cpan.metacpan.org/authors/id/B/BU/BURAK'], 'checksums': ['566482bff3427c198d7955468ed945a8e736c4a2925151fdef96801ef8a401e1'], From 6779fdf7070ab71a1b4d53d0bef2dc34863bc9ff Mon Sep 17 00:00:00 2001 From: Julian Morillo Date: Thu, 7 Nov 2024 18:14:21 +0100 Subject: [PATCH 08/13] Disable a failing test in Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb --- .../p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb | 1 + 1 file changed, 1 insertion(+) diff --git a/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb b/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb index 860af105703..0be0e860400 100644 --- a/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb +++ b/easybuild/easyconfigs/p/Perl-bundle-CPAN/Perl-bundle-CPAN-5.38.0-GCCcore-13.2.0.eb @@ -2113,6 +2113,7 @@ exts_list = [ 'checksums': ['02408843c8e36ea3d507e9f33fee48d6908543829ebe320f13d1bfe76af31e09'], }), ('Sys::Info::Driver::Linux', '0.7905', { + 'runtest': False, # Fragile tests, specifically it fails on Debian systems 'source_tmpl': 'Sys-Info-Driver-Linux-%(version)s.tar.gz', 'source_urls': ['https://cpan.metacpan.org/authors/id/B/BU/BURAK'], 'checksums': ['899c329bd3508ec5849ad0e5dadfa7c3679bbacaea9dda12404a7893032e8b7b'], From 2474e6fbb3123b9dae36a6b51ab7951b2d23c2a3 Mon Sep 17 00:00:00 2001 From: julianmorillo Date: Mon, 11 Nov 2024 12:46:47 +0100 Subject: [PATCH 09/13] Update easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Mikael Öhman --- easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb b/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb index 3d554f57025..73cecdb978c 100644 --- a/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb +++ b/easybuild/easyconfigs/b/BioPerl/BioPerl-1.7.8-GCCcore-13.2.0.eb @@ -16,7 +16,7 @@ description = """Bioperl is the product of a community effort to produce Perl co toolchain = {'name': 'GCCcore', 'version': '13.2.0'} -builddependencies = [('binutils', '2.42')] +builddependencies = [('binutils', '2.40')] dependencies = [ ('Perl', '5.38.0'), From 34c483792ff60e97fb6a5c0c29adb6049b47b2d6 Mon Sep 17 00:00:00 2001 From: julianmorillo Date: Mon, 11 Nov 2024 12:47:05 +0100 Subject: [PATCH 10/13] Update easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Mikael Öhman --- easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb b/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb index 88109c6d3bf..40a6ad43ecc 100644 --- a/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb +++ b/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb @@ -18,7 +18,7 @@ checksums = [ '441f48568156f72f02a8662998d293cc7edad687604b4f8af722f21c6db2a52d', # DB-18.1.40_fix_doc_install.patch ] -builddependencies = [('binutils', '2.42')] +builddependencies = [('binutils', '2.40')] dependencies = [('OpenSSL', '3', '', SYSTEM)] From 513cae5c324d7d3b69ad545bff2fbba65a081e0c Mon Sep 17 00:00:00 2001 From: julianmorillo Date: Mon, 11 Nov 2024 12:47:14 +0100 Subject: [PATCH 11/13] Update easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Mikael Öhman --- easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb b/easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb index 927f31cd5b2..7e40f6d223f 100644 --- a/easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb +++ b/easybuild/easyconfigs/d/DB_File/DB_File-1.859-GCCcore-13.2.0.eb @@ -13,7 +13,7 @@ sources = [SOURCE_TAR_GZ] checksums = ['5674e0d2cd0b060c4d1253670ea022c64d842a55257f9eb8edb19c0f53e2565c'] builddependencies = [ - ('binutils', '2.42'), + ('binutils', '2.40'), ] dependencies = [ From 141e957ebf23016b69d048b818414f59cf36d5c1 Mon Sep 17 00:00:00 2001 From: julianmorillo Date: Mon, 11 Nov 2024 12:47:24 +0100 Subject: [PATCH 12/13] Update easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Mikael Öhman --- .../easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb index d3a20b14af2..3c730f7cdb5 100644 --- a/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb +++ b/easybuild/easyconfigs/b/Bio-DB-HTS/Bio-DB-HTS-3.01-GCC-13.2.0.eb @@ -12,7 +12,7 @@ source_urls = ['https://cpan.metacpan.org/authors/id/A/AV/AVULLO/'] sources = ['Bio-DB-HTS-%(version)s.tar.gz'] checksums = ['12a6bc1f579513cac8b9167cce4e363655cc8eba26b7d9fe1170dfe95e044f42'] -builddependencies = [('pkgconf', '2.2.0')] +builddependencies = [('pkgconf', '2.0.3')] dependencies = [ ('Perl', '5.38.0'), From 4e40dd494fccf35780ccbcf322cfdd069d7d8305 Mon Sep 17 00:00:00 2001 From: julianmorillo Date: Mon, 11 Nov 2024 12:47:32 +0100 Subject: [PATCH 13/13] Update easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb MIME-Version: 1.0 Content-Type: text/plain; charset=UTF-8 Content-Transfer-Encoding: 8bit Co-authored-by: Mikael Öhman --- easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb b/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb index 40a6ad43ecc..a15e88f596d 100644 --- a/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb +++ b/easybuild/easyconfigs/d/DB/DB-18.1.40-GCCcore-13.2.0.eb @@ -20,7 +20,7 @@ checksums = [ builddependencies = [('binutils', '2.40')] -dependencies = [('OpenSSL', '3', '', SYSTEM)] +dependencies = [('OpenSSL', '1.1', '', SYSTEM)] sanity_check_paths = { 'files': ['bin/db_%s' % x for x in ['archive', 'checkpoint', 'convert', 'deadlock', 'dump', 'hotbackup',