workflow.cwl

#!/usr/bin/env cwl-runner

cwlVersion: v1.0
class: Workflow

requirements:
  InitialWorkDirRequirement:
    listing:
      - $(inputs.code)
      - $(inputs.data)

inputs:
  data:
    type: Directory
  code:
    type: Directory

outputs:
  mass4l_combine_userlvl3.pdf:
    type: File
    outputSource:
      step2/mass4l_combine_userlvl3.pdf

steps:
  step1data:
    run: step1data.cwl
    in:
      code: code
      data: data
    out: [DoubleMuParked2012C_10000_Higgs.root, step1data.log]
  step1mc:
    run: step1mc.cwl
    in:
      code: code
      data: data
    out: [Higgs4L1file.root, step1mc.log]
  step2:
    run: step2.cwl
    in:
      code: code
      data: data
      DoubleMuParked2012C_10000_Higgs: step1data/DoubleMuParked2012C_10000_Higgs.root
      Higgs4L1file: step1mc/Higgs4L1file.root
    out: [mass4l_combine_userlvl3.pdf, step2.log]