Dockerfile_ubuntu16

# Use an official Ubuntu 16.04 as a parent image
FROM ubuntu:16.04

# Create user & log in
ENV DEBIAN_FRONTEND noninteractive
RUN apt-get update
RUN apt-get install -y --no-install-recommends apt-utils
RUN apt-get install -y sudo apt-transport-https
RUN apt-key adv --keyserver keyserver.ubuntu.com --recv-keys E298A3A825C0D65DFD57CBB651716619E084DAB9
RUN bash -c "echo 'deb https://cloud.r-project.org/bin/linux/ubuntu xenial-cran35/' >> /etc/apt/sources.list"
RUN apt-get update
RUN apt-get install -y python3-pip python3-dev openjdk-8-jdk r-base sqlite3 libsqlite3-dev sqlcipher libsqlcipher-dev git nano
RUN R CMD javareconf
RUN Rscript -e "install.packages(c('openVA', 'CrossVA'))"

RUN useradd -m ovauser -s /bin/bash -G sudo
ENV DEBIAN_FRONTEND teletype

USER ovauser:ovauser
WORKDIR /home/ovauser
RUN export LC_ALL=C.UTF-8
RUN export LANG=C.UTF-8

RUN python3 -m pip install --upgrade pip --user
RUN python3 -m pip install --upgrade setuptools --user
RUN python3 -m pip install openva-pipeline --user

# Launch container with command:
# $ docker run -u 0 -it containerName bash
# change ovauser's password and switch to account with:
# $ passwd ovauser
# $ su - ovauser