.travis.yml

languague: cpp

env:
  global:
    - secure: S3VMaROvyrkRV/t2Lmdtt6/B3R7IHynfYX0kRSDL5mW/zkxUpV3Wm8TMOcsUpz7vBX53UK+ze882L/nIzBhVc5NEl2unswqDd8LYMZmAqKeeKB3RiSkdCZPOAJVVvru3M3hy/RIVxQgyCRLK8QSwhax0nVqRu51JL4WUMrDkqxo=
    - OPENCL_STEM=$HOME/opencl

matrix:
  include:
  
  # No OpenCL
  - os: linux
    sudo: false
    compiler: gcc
    addons:
      apt:
        sources:
        - r-packages-precise
        packages:
        - r-base-dev
        - r-recommended
        - texinfo
        - qpdf
  
  # With AMD OpenCL
  - os: linux
    sudo: false
    compiler: gcc
    addons:
      apt:
        sources:
        - r-packages-precise
        packages:
        - r-base-dev
        - r-recommended
        - texinfo
        - qpdf
    env:
      - OPENCL_LIB=amdappsdk
      - OPENCL_VERSION="12"
      - AMDAPPSDK_VERSION=291 # OpenCL 1.2   
      - AMDAPPSDKROOT=${OPENCL_STEM}/AMDAPPSDK
      - OPENCL_ROOT=${AMDAPPSDKROOT}
    
cache:
  directories:
    - ~/Rlib     # R libraries
    - ~/texlive  # LaTex 
    - ~/bin      # pandoc 

before_install:
  - |
    if [[ ${OPENCL_LIB} == "amdappsdk" ]]; then    
      mkdir -p ${OPENCL_STEM}
      bash .travis/amd_sdk.sh ${AMDAPPSDK_VERSION}
      tar -xjf AMD-SDK.tar.bz2
      export OPENCL_VENDOR_PATH=${AMDAPPSDKROOT}/etc/OpenCL/vendors
      mkdir -p ${OPENCL_VENDOR_PATH}
      sh AMD-APP-SDK*.sh --tar -xf -C ${AMDAPPSDKROOT}
      echo libamdocl64.so > ${OPENCL_VENDOR_PATH}/amdocl64.icd
      export LD_LIBRARY_PATH=${AMDAPPSDKROOT}/lib/x86_64:${LD_LIBRARY_PATH}
      export CMAKE_LIBRARY_PATH=${AMDAPPSDKROOT}/lib/x86_64;      
      chmod +x ${AMDAPPSDKROOT}/bin/x86_64/clinfo
      ${AMDAPPSDKROOT}/bin/x86_64/clinfo
      rm AMD-APP-SDK*.sh
      rm AMD-SDK.tar.bz2
    fi    

# install dependencies
install:
#  - rm -rf ~/Rlib
  # Save R packages in Rlib
  - mkdir -p ~/Rlib
  - echo 'R_LIBS=~/Rlib' > .Renviron
  - echo 'options(repos = "http://cran.rstudio.com")' > .Rprofile
  - mkdir -p ~/.R
  - grep '\-g'  /etc/R/Makeconf | sed 's/-g//g' > ~/.R/Makevars # Turn off debug symbols
  # Build LaTex and pandoc
  - mkdir -p ~/bin
  - wget -q -O - https://github.com/yihui/crandalf/raw/master/inst/scripts/install-texlive | bash
  - wget -q -O - https://github.com/yihui/crandalf/raw/master/inst/scripts/install-pandoc | bash
  - PATH=$HOME/texlive/bin/x86_64-linux:$PATH  
  # Install R packages
  - Rscript -e "if (!require('devtools')) install.packages('devtools')"   
  - Rscript -e "if (!require('BH')) install.packages('BH')" 
  - Rscript -e "if (!require('drat')) install.packages('drat')"
  - Rscript -e "if (!require('BoostCompiledLibraries')) devtools::install_github('OHDSI/BoostCompiledLibraries')"
  - Rscript -e "if (!require('Rcpp')) install.packages('Rcpp')"
  - Rscript -e "if (!require('testthat')) install.packages('testthat')"  
    
before_script:
  - export PKG_NAME=$(Rscript -e 'cat(paste0(devtools::as.package(".")$package))')
  - export PKG_TARBALL=$(Rscript -e 'pkg <- devtools::as.package("."); cat(paste0(pkg$package,"_",pkg$version,".tar.gz"))')
  - export CPLUS_INCLUDE_PATH=${OPENCL_ROOT}/include:${CPLUS_INCLUDE_PATH}
  - export LD_LIBRARY_PATH=${OPENCL_ROOT}/lib/x86_64:${LD_LIBRARY_PATH}  
  - export LIBRARY_PATH=${OPENCL_ROOT}/lib/x86_64:${LIBRARY_PATH}
#  - echo $AMDAPPSDKROOT
#  - echo $OPENCL_ROOT
#  - echo $CPLUS_INCLUDE_PATH
#  - echo $LD_LIBRARY_PATH
#  - echo $LIBRARY_PATH
#  - ls $HOME/opencl/lib
#  - ls $HOME/opencl/lib/bin 
#  - find $OPENCL_ROOT
    
 # Build and check package
script:
  - R CMD build .
  - _R_CHECK_CRAN_INCOMING_=FALSE R CMD check "${PKG_TARBALL}" --as-cran
  - cat ${PKG_NAME}.Rcheck/00install.out # Print out install / compile log
  # Print out device information   
#  - Rscript -e "install.packages('${PKG_TARBALL}', lib = '.', repo = NULL, type = 'source'); RcppBoostCompute::compute_hello_world()" 
  
after_success:
#  - Rscript -e 'covr::codecov()'
  # Rebuild docker container
#  - curl --data "build=true" -X POST https://registry.hub.docker.com/u/ohdsi/broadsea-methodslibrary/trigger/f0b51cec-4027-4781-9383-4b38b42dd4f5/
  # Rebuild drat repo   
  - test $TRAVIS_PULL_REQUEST == "false" && test $TRAVIS_BRANCH == "master" && bash deploy.sh

notifications:
  recipients:
    - msuchard@gmail.com
  email:
    on_success: change
    on_failure: always