diff --git a/.azure-pipelines/azure-pipelines-linux.yml b/.azure-pipelines/azure-pipelines-linux.yml index 64c4c1c..6ea223e 100755 --- a/.azure-pipelines/azure-pipelines-linux.yml +++ b/.azure-pipelines/azure-pipelines-linux.yml @@ -81,6 +81,9 @@ jobs: - script: | export CI=azure + export flow_run_id=azure_$(Build.BuildNumber).$(System.JobAttempt) + export remote_url=$(Build.Repository.Uri) + export sha=$(Build.SourceVersion) export GIT_BRANCH=$BUILD_SOURCEBRANCHNAME export FEEDSTOCK_NAME=$(basename ${BUILD_REPOSITORY_NAME}) if [[ "${BUILD_REASON:-}" == "PullRequest" ]]; then diff --git a/.azure-pipelines/azure-pipelines-osx.yml b/.azure-pipelines/azure-pipelines-osx.yml index 6ebcb99..fc75a05 100755 --- a/.azure-pipelines/azure-pipelines-osx.yml +++ b/.azure-pipelines/azure-pipelines-osx.yml @@ -44,6 +44,9 @@ jobs: # TODO: Fast finish on azure pipelines? - script: | export CI=azure + export flow_run_id=azure_$(Build.BuildNumber).$(System.JobAttempt) + export remote_url=$(Build.Repository.Uri) + export sha=$(Build.SourceVersion) export OSX_FORCE_SDK_DOWNLOAD="1" export GIT_BRANCH=$BUILD_SOURCEBRANCHNAME export FEEDSTOCK_NAME=$(basename ${BUILD_REPOSITORY_NAME}) diff --git a/.azure-pipelines/azure-pipelines-win.yml b/.azure-pipelines/azure-pipelines-win.yml index 94db650..ffb38f2 100755 --- a/.azure-pipelines/azure-pipelines-win.yml +++ b/.azure-pipelines/azure-pipelines-win.yml @@ -54,6 +54,9 @@ jobs: PYTHONUNBUFFERED: 1 CONFIG: $(CONFIG) CI: azure + flow_run_id: azure_$(Build.BuildNumber).$(System.JobAttempt) + remote_url: $(Build.Repository.Uri) + sha: $(Build.SourceVersion) UPLOAD_PACKAGES: $(UPLOAD_PACKAGES) UPLOAD_TEMP: $(UPLOAD_TEMP) BINSTAR_TOKEN: $(BINSTAR_TOKEN) diff --git a/.github/CODEOWNERS b/.github/CODEOWNERS index c7ec1e1..34a3850 100644 --- a/.github/CODEOWNERS +++ b/.github/CODEOWNERS @@ -1 +1 @@ -* @sebp @janjagusch @xhochy \ No newline at end of file +* @janjagusch @sebp @xhochy \ No newline at end of file diff --git a/.gitignore b/.gitignore index c89ecb7..c002910 100644 --- a/.gitignore +++ b/.gitignore @@ -1,3 +1,13 @@ -*.pyc +# User content belongs under recipe/. +# Feedstock configuration goes in `conda-forge.yml` +# Everything else is managed by the conda-smithy rerender process. +# Please do not modify + +* +!/conda-forge.yml -build_artifacts +!/*/ +!/recipe/** +!/.ci_support/** + +*.pyc diff --git a/.scripts/build_steps.sh b/.scripts/build_steps.sh index bd9e671..eba1dfd 100755 --- a/.scripts/build_steps.sh +++ b/.scripts/build_steps.sh @@ -28,13 +28,15 @@ conda-build: pkgs_dirs: - ${FEEDSTOCK_ROOT}/build_artifacts/pkg_cache - /opt/conda/pkgs +solver: libmamba CONDARC +export CONDA_LIBMAMBA_SOLVER_NO_CHANNELS_FROM_INSTALLED=1 mamba install --update-specs --yes --quiet --channel conda-forge --strict-channel-priority \ - pip mamba conda-build boa conda-forge-ci-setup=3 + pip mamba conda-build boa conda-forge-ci-setup=4 mamba update --update-specs --yes --quiet --channel conda-forge --strict-channel-priority \ - pip mamba conda-build boa conda-forge-ci-setup=3 + pip mamba conda-build boa conda-forge-ci-setup=4 # set up the condarc setup_conda_rc "${FEEDSTOCK_ROOT}" "${RECIPE_ROOT}" "${CONFIG_FILE}" @@ -55,6 +57,12 @@ if [[ -f "${FEEDSTOCK_ROOT}/LICENSE.txt" ]]; then cp "${FEEDSTOCK_ROOT}/LICENSE.txt" "${RECIPE_ROOT}/recipe-scripts-license.txt" fi +if [[ "${sha:-}" == "" ]]; then + pushd ${FEEDSTOCK_ROOT} + sha=$(git rev-parse HEAD) + popd +fi + if [[ "${BUILD_WITH_CONDA_DEBUG:-0}" == 1 ]]; then if [[ "x${BUILD_OUTPUT_ID:-}" != "x" ]]; then EXTRA_CB_OPTIONS="${EXTRA_CB_OPTIONS:-} --output-id ${BUILD_OUTPUT_ID}" @@ -68,7 +76,8 @@ if [[ "${BUILD_WITH_CONDA_DEBUG:-0}" == 1 ]]; then else conda mambabuild "${RECIPE_ROOT}" -m "${CI_SUPPORT}/${CONFIG}.yaml" \ --suppress-variables ${EXTRA_CB_OPTIONS:-} \ - --clobber-file "${CI_SUPPORT}/clobber_${CONFIG}.yaml" + --clobber-file "${CI_SUPPORT}/clobber_${CONFIG}.yaml" \ + --extra-meta flow_run_id="${flow_run_id:-}" remote_url="${remote_url:-}" sha="${sha:-}" ( startgroup "Validating outputs" ) 2> /dev/null validate_recipe_outputs "${FEEDSTOCK_NAME}" diff --git a/.scripts/run_docker_build.sh b/.scripts/run_docker_build.sh index 9236239..b70ef01 100755 --- a/.scripts/run_docker_build.sh +++ b/.scripts/run_docker_build.sh @@ -91,6 +91,9 @@ docker run ${DOCKER_RUN_ARGS} \ -e CPU_COUNT \ -e BUILD_WITH_CONDA_DEBUG \ -e BUILD_OUTPUT_ID \ + -e flow_run_id \ + -e remote_url \ + -e sha \ -e BINSTAR_TOKEN \ -e FEEDSTOCK_TOKEN \ -e STAGING_BINSTAR_TOKEN \ diff --git a/.scripts/run_osx_build.sh b/.scripts/run_osx_build.sh index 870c49a..9259eb9 100755 --- a/.scripts/run_osx_build.sh +++ b/.scripts/run_osx_build.sh @@ -22,11 +22,13 @@ bash $MINIFORGE_FILE -b -p ${MINIFORGE_HOME} source ${MINIFORGE_HOME}/etc/profile.d/conda.sh conda activate base +export CONDA_SOLVER="libmamba" +export CONDA_LIBMAMBA_SOLVER_NO_CHANNELS_FROM_INSTALLED=1 mamba install --update-specs --quiet --yes --channel conda-forge --strict-channel-priority \ - pip mamba conda-build boa conda-forge-ci-setup=3 + pip mamba conda-build boa conda-forge-ci-setup=4 mamba update --update-specs --yes --quiet --channel conda-forge --strict-channel-priority \ - pip mamba conda-build boa conda-forge-ci-setup=3 + pip mamba conda-build boa conda-forge-ci-setup=4 @@ -45,6 +47,10 @@ else echo -e "\n\nNot mangling homebrew as we are not running in CI" fi +if [[ "${sha:-}" == "" ]]; then + sha=$(git rev-parse HEAD) +fi + echo -e "\n\nRunning the build setup script." source run_conda_forge_build_setup @@ -77,7 +83,8 @@ else conda mambabuild ./recipe -m ./.ci_support/${CONFIG}.yaml \ --suppress-variables ${EXTRA_CB_OPTIONS:-} \ - --clobber-file ./.ci_support/clobber_${CONFIG}.yaml + --clobber-file ./.ci_support/clobber_${CONFIG}.yaml \ + --extra-meta flow_run_id="$flow_run_id" remote_url="$remote_url" sha="$sha" ( startgroup "Validating outputs" ) 2> /dev/null validate_recipe_outputs "${FEEDSTOCK_NAME}" diff --git a/.scripts/run_win_build.bat b/.scripts/run_win_build.bat index 07d3445..48734de 100755 --- a/.scripts/run_win_build.bat +++ b/.scripts/run_win_build.bat @@ -17,10 +17,14 @@ call :start_group "Configuring conda" :: Activate the base conda environment call activate base +:: Configure the solver +set "CONDA_SOLVER=libmamba" +if !errorlevel! neq 0 exit /b !errorlevel! +set "CONDA_LIBMAMBA_SOLVER_NO_CHANNELS_FROM_INSTALLED=1" :: Provision the necessary dependencies to build the recipe later echo Installing dependencies -mamba.exe install "python=3.10" pip mamba conda-build boa conda-forge-ci-setup=3 -c conda-forge --strict-channel-priority --yes +mamba.exe install "python=3.10" pip mamba conda-build boa conda-forge-ci-setup=4 -c conda-forge --strict-channel-priority --yes if !errorlevel! neq 0 exit /b !errorlevel! :: Set basic configuration @@ -38,7 +42,13 @@ if EXIST LICENSE.txt ( copy LICENSE.txt "recipe\\recipe-scripts-license.txt" ) if NOT [%HOST_PLATFORM%] == [%BUILD_PLATFORM%] ( - set "EXTRA_CB_OPTIONS=%EXTRA_CB_OPTIONS% --no-test" + if [%CROSSCOMPILING_EMULATOR%] == [] ( + set "EXTRA_CB_OPTIONS=%EXTRA_CB_OPTIONS% --no-test" + ) +) + +if NOT [%flow_run_id%] == [] ( + set "EXTRA_CB_OPTIONS=%EXTRA_CB_OPTIONS% --extra-meta flow_run_id=%flow_run_id% remote_url=%remote_url% sha=%sha%" ) call :end_group diff --git a/README.md b/README.md index 4651fec..2d214d4 100644 --- a/README.md +++ b/README.md @@ -317,7 +317,7 @@ available continuous integration services. Thanks to the awesome service provide [CircleCI](https://circleci.com/), [AppVeyor](https://www.appveyor.com/), [Drone](https://cloud.drone.io/welcome), and [TravisCI](https://travis-ci.com/) it is possible to build and upload installable packages to the -[conda-forge](https://anaconda.org/conda-forge) [Anaconda-Cloud](https://anaconda.org/) +[conda-forge](https://anaconda.org/conda-forge) [anaconda.org](https://anaconda.org/) channel for Linux, Windows and OSX respectively. To manage the continuous integration and simplify feedstock maintenance @@ -366,5 +366,6 @@ Feedstock Maintainers ===================== * [@janjagusch](https://github.com/janjagusch/) +* [@sebp](https://github.com/sebp/) * [@xhochy](https://github.com/xhochy/) diff --git a/recipe/meta.yaml b/recipe/meta.yaml index cd0a5c2..521040d 100644 --- a/recipe/meta.yaml +++ b/recipe/meta.yaml @@ -1,5 +1,5 @@ {% set name = "scikit-survival" %} -{% set version = "0.22.1" %} +{% set version = "0.22.2" %} package: @@ -8,10 +8,10 @@ package: source: url: https://pypi.io/packages/source/{{ name[0] }}/{{ name }}/scikit-survival-{{ version }}.tar.gz - sha256: 16dd07839885f526fd5523ac14c81f02f73836c6a6db5ea4cede57bf68b292ff + sha256: 0e9c86750c0de1580662675110994f07a3568955aef14af81316f2b3100332bf build: - number: 1 + number: 0 script: {{ PYTHON }} -m pip install . -vv skip: true # [py<38]