diff --git a/.github/workflows/check-bioc.yml b/.github/workflows/check-bioc.yml index 9fee5c1..807f800 100644 --- a/.github/workflows/check-bioc.yml +++ b/.github/workflows/check-bioc.yml @@ -203,7 +203,7 @@ jobs: shell: Rscript {0} - name: Install pkgdown - if: github.ref == 'refs/heads/devel' && env.run_pkgdown == 'true' && runner.os == 'Linux' + if: github.ref == 'refs/heads/main' && env.run_pkgdown == 'true' && runner.os == 'Linux' run: | remotes::install_github("r-lib/pkgdown") shell: Rscript {0} diff --git a/_pkgdown.yml b/_pkgdown.yml index c89e9ad..c4a101b 100644 --- a/_pkgdown.yml +++ b/_pkgdown.yml @@ -59,6 +59,8 @@ reference: meta data, such as molecular identifiers, pathways etc. contents: - ends_with('_database') + - rds_cache + - github_file - is_writable - read_database - write_database @@ -78,7 +80,7 @@ reference: - add_labels - calc_ppm_diff - calc_rt_diff - - combine_columns + - prioritise_columns - combine_sources - vertical_join - combine_records @@ -93,7 +95,11 @@ reference: - normalise_lipids - normalise_strings - trim_whitespace - - concatenate_columns + - combine_columns + - select_columns + - split_column + - split_records + - AnnotationDb_select - title: "Combining records" desc: > Combining records is an important step in the annotation mashing workflow. @@ -139,10 +145,10 @@ reference: - ends_with('_dictionary') - title: "Additional functions" desc: > - Various supporting functions are used by MetMashR + Supporting functions are used by MetMashR contents: - - struct_venn_set - check_for_columns + - required_cols home: links: - text: View on Bioconductor