Changelog

All notable changes to the container-template project will be documented in this file.

The format is based on Keep a Changelog, and this project adheres to Semantic Versioning.

[Unreleased]

Added

Added Docker build push action to push images to GH container registry
Added Python environment with basic dependencies for MiX3R (jupyter, numpy, pandas, scipy, matplotlib, numba, ++)

Updated

updated LDpred2 R scripts (SHA: 5440e1c9040ec487694b30092d70fc1cf34c5837 of github.com/comorment/containers)
updated LDpred2 R scripts (SHA: d882dd9cbefd457d1f14f2e7d8ed91fdabd08937 of github.com/comorment/containers)
use testthat for checking R package installation
Updated Dockerfile compiling PLINK-2.0 inplace

Fixed

plink2 binary now works on Macs w. M1/M2 CPUs

Removed

removals goes here

[1.0.0rc0] - 2023-08-24

Added

ldpred2.sif Singularity container and scripts