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Error: package or namespace load failed for ‘leidenbase’ in dyn.load #41

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stroke1989 opened this issue Jul 8, 2023 · 0 comments

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@stroke1989
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Hi,
I installed leidenbase in R 4.3.1(ubuntu 18.04.6 LTS), errors occurred:
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgfortran.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgfortran.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libquadmath.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libquadmath.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgfortran.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgfortran.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libquadmath.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libquadmath.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libstdc++.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libstdc++.so: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgcc_s.so.1: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgcc_s.so.1: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgcc_s.so.1: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010001
/usr/bin/ld: warning: /home/neurospine/anaconda3/lib/libgcc_s.so.1: unsupported GNU_PROPERTY_TYPE (5) type: 0xc0010002
installing to /home/neurospine/R/x86_64-pc-linux-gnu-library/4.3/00LOCK-leidenbase-0.1.9/00new/leidenbase/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘leidenbase’ in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/home/neurospine/R/x86_64-pc-linux-gnu-library/4.3/00LOCK-leidenbase-0.1.9/00new/leidenbase/libs/leidenbase.so':
libgfortran.so.5: cannot open shared object file: No such file or directory
Error: loading failed
Execution halted
ERROR: loading failed

  • removing ‘/home/neurospine/R/x86_64-pc-linux-gnu-library/4.3/leidenbase’
    could anyone help me out? Appreciate! Details in attachment
    install.out.txt
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