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Install leidenbase failed #29

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Ares1314 opened this issue May 18, 2021 · 0 comments
Open

Install leidenbase failed #29

Ares1314 opened this issue May 18, 2021 · 0 comments

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@Ares1314
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Hi,

When I install leidenbase using Rstudio (R 4.0.5) and as following codes devtools::install_github('cole-trapnell-lab/leidenbase') ,
an error occured:

ld: warning: directory not found for option '-L/usr/local/gfortran/lib/gcc/x86_64-apple-darwin18/8.2.0'
ld: library not found for -lquadmath
clang: error: linker command failed with exit code 1 (use -v to see invocation)
make: *** [leidenbase.so] Error 1
ERROR: compilation failed for package ‘leidenbase’
* removing ‘/Library/Frameworks/R.framework/Versions/4.0/Resources/library/leidenbase’
Warning message:
In i.p(...) :
  installation of package ‘/var/folders/db/2pdswwk10pxdhvxh0854wtdr0000gn/T//RtmpfFyzEF/file62966a038d47/leidenbase_0.1.3.tar.gz’ had non-zero exit status

my PC is macOS 11, and cpu is M1. Before install leidenbase, the gfortran 11 is download and install successfully from wedsite: https://github.com/fxcoudert/gfortran-for-macOS/releases

what can i do for this problem?
I appreciate your solicitude, expect that is your to reply!

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