From 87626b8c68051b06b44b503df62e483d0deff11b Mon Sep 17 00:00:00 2001
From: Nick Wardle <nckw@cern.ch>
Date: Thu, 5 Oct 2023 18:39:17 +0200
Subject: [PATCH 1/3] Adding folder CAT23001 with datacards used in the paper

---
 .../CAT23001/counting-experiment-datacard.txt |  15 ++++++++++++++
 .../default-physics-model-datacard.txt        |  15 ++++++++++++++
 .../CAT23001/example-abcd-datacard.txt        |  18 +++++++++++++++++
 .../CAT23001/multi-signal-datacard.txt        |  19 ++++++++++++++++++
 .../parametric-analysis-datacard-input.root   | Bin 0 -> 14419 bytes
 .../CAT23001/parametric-analysis-datacard.txt |  18 +++++++++++++++++
 .../template-analysis-datacard-input.root     | Bin 0 -> 9188 bytes
 .../CAT23001/template-analysis-datacard.txt   |  18 +++++++++++++++++
 8 files changed, 103 insertions(+)
 create mode 100644 data/tutorials/CAT23001/counting-experiment-datacard.txt
 create mode 100644 data/tutorials/CAT23001/default-physics-model-datacard.txt
 create mode 100644 data/tutorials/CAT23001/example-abcd-datacard.txt
 create mode 100644 data/tutorials/CAT23001/multi-signal-datacard.txt
 create mode 100644 data/tutorials/CAT23001/parametric-analysis-datacard-input.root
 create mode 100644 data/tutorials/CAT23001/parametric-analysis-datacard.txt
 create mode 100644 data/tutorials/CAT23001/template-analysis-datacard-input.root
 create mode 100644 data/tutorials/CAT23001/template-analysis-datacard.txt

diff --git a/data/tutorials/CAT23001/counting-experiment-datacard.txt b/data/tutorials/CAT23001/counting-experiment-datacard.txt
new file mode 100644
index 00000000000..0eeb480a462
--- /dev/null
+++ b/data/tutorials/CAT23001/counting-experiment-datacard.txt
@@ -0,0 +1,15 @@
+imax 1
+jmax 3
+kmax 3
+# A single channel - ch1 - in which we observed 0 events
+bin            ch1
+observation    0
+# ----------
+bin            ch1   ch1   ch1   ch1
+process        ppX   qqWW  ggWW  others
+process        0     1     2     3
+rate           1.47  0.64  0.06  0.22
+# ----------
+lumi    lnN    1.11    -   1.11    -   
+xs_ggH  lnN    1.16    -     -     -    
+WW_norm gmN 4    -   0.16    -     -   
diff --git a/data/tutorials/CAT23001/default-physics-model-datacard.txt b/data/tutorials/CAT23001/default-physics-model-datacard.txt
new file mode 100644
index 00000000000..cdf11b07a88
--- /dev/null
+++ b/data/tutorials/CAT23001/default-physics-model-datacard.txt
@@ -0,0 +1,15 @@
+imax 1  number of channels
+jmax 1  number of backgrounds
+kmax 2  number of nuisance parameters (sources of systematical uncertainties)
+------------
+# One channel, in which we observe 0 events
+bin            ch1
+observation    0
+# ------------
+bin            ch1    ch1
+process        S      B
+process        0      1
+rate           4.76   1.47
+# ------------
+deltaS  lnN    1.20   -      20\% uncertainty on signal
+deltaB  lnN    -      1.50   50\% uncertainty on background
diff --git a/data/tutorials/CAT23001/example-abcd-datacard.txt b/data/tutorials/CAT23001/example-abcd-datacard.txt
new file mode 100644
index 00000000000..485c4c79967
--- /dev/null
+++ b/data/tutorials/CAT23001/example-abcd-datacard.txt
@@ -0,0 +1,18 @@
+imax 4  number of channels
+jmax 1  number of processes -1
+kmax *  number of nuisance parameters (sources of systematical uncertainties)
+# -------
+bin         B      C      D      A
+observation 50    100     500    16
+# -------
+bin         B      C      D      A     A
+process     bkg    bkg    bkg    bkg   sig
+process     1      2      3      4     0
+rate        1      1      1      1     3
+# -------
+lumi   lnN  -      -      -      -     1.02
+eff    lnN  -      -      -      -     1.01
+alpha rateParam A bkg (@0*@1/@2) beta,gamma,delta
+beta  rateParam B bkg 50
+gamma rateParam C bkg 100
+delta rateParam D bkg 500
diff --git a/data/tutorials/CAT23001/multi-signal-datacard.txt b/data/tutorials/CAT23001/multi-signal-datacard.txt
new file mode 100644
index 00000000000..ddab1d5e1c0
--- /dev/null
+++ b/data/tutorials/CAT23001/multi-signal-datacard.txt
@@ -0,0 +1,19 @@
+imax 2
+jmax 2 
+kmax *
+------------
+shapes *  dijet  FAKE
+shapes *  incl   FAKE
+------------
+bin           incl dijet   
+observation   166  8 
+------------
+bin               incl    incl    incl    dijet   dijet   dijet  
+process           ggH_hgg qqH_hgg bkg     ggH_hgg qqH_hgg bkg
+process            -1     0       1       -1      0        1
+rate              21      1.6     140     0.4     0.95     3.2 
+------------
+QCDscale_ggH lnN  1.12    -       -       1.12    -        -
+pdf_gg       lnN  1.08    -       -       1.08    -        -
+pdf_qqbar    lnN   -      1.025   -       -       1.025    -
+bg_incl      lnN   -      -       1.05    -       -        -  
diff --git a/data/tutorials/CAT23001/parametric-analysis-datacard-input.root b/data/tutorials/CAT23001/parametric-analysis-datacard-input.root
new file mode 100644
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diff --git a/data/tutorials/CAT23001/parametric-analysis-datacard.txt b/data/tutorials/CAT23001/parametric-analysis-datacard.txt
new file mode 100644
index 00000000000..d7613c5b8cf
--- /dev/null
+++ b/data/tutorials/CAT23001/parametric-analysis-datacard.txt
@@ -0,0 +1,18 @@
+imax 1
+jmax 1
+kmax 2
+# ---------------
+shapes data_obs   bin1 parametric-analysis-datacard-input.root w:data_obs
+shapes signal     bin1 parametric-analysis-datacard-input.root w:sig
+shapes background bin1 parametric-analysis-datacard-input.root w:bkg
+# ---------------
+bin                bin1
+observation        567
+# ---------------
+bin                bin1   bin1
+process            signal background
+process            0      1
+rate               1      1
+# ---------------
+lumi         lnN   1.1    -
+sigma        param 1.0    0.1
diff --git a/data/tutorials/CAT23001/template-analysis-datacard-input.root b/data/tutorials/CAT23001/template-analysis-datacard-input.root
new file mode 100644
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HcmV?d00001

diff --git a/data/tutorials/CAT23001/template-analysis-datacard.txt b/data/tutorials/CAT23001/template-analysis-datacard.txt
new file mode 100644
index 00000000000..4b22e53d900
--- /dev/null
+++ b/data/tutorials/CAT23001/template-analysis-datacard.txt
@@ -0,0 +1,18 @@
+imax 1
+jmax 1
+kmax 4
+# ---------------
+shapes * * template-analysis-datacard-input.root $PROCESS $PROCESS_$SYSTEMATIC
+# ---------------
+bin         ch1
+observation 85
+# ------------------------------
+bin             ch1        ch1
+process         signal     background
+process         0          1
+rate            10         100
+# --------------------------------
+lumi     lnN    1.1       1.0
+bgnorm   lnN    1.0       1.3
+alpha  shape    -          1   uncertainty on background shape and normalization
+sigma  shape    0.5        -   uncertainty on signal resolution. 

From 59abb3ab2cedb26cd7e5175e6b755e1941fae1c9 Mon Sep 17 00:00:00 2001
From: Nick Wardle <nckw@cern.ch>
Date: Fri, 1 Dec 2023 15:15:16 +0100
Subject: [PATCH 2/3]  updates for changes needed for paper

---
 .../CAT23001/parametric-analysis-datacard.txt |  14 ++++++++------
 .../template-analysis-datacard-input.root     | Bin 9188 -> 8724 bytes
 .../CAT23001/template-analysis-datacard.txt   |   2 +-
 3 files changed, 9 insertions(+), 7 deletions(-)

diff --git a/data/tutorials/CAT23001/parametric-analysis-datacard.txt b/data/tutorials/CAT23001/parametric-analysis-datacard.txt
index d7613c5b8cf..30e81a7cb89 100644
--- a/data/tutorials/CAT23001/parametric-analysis-datacard.txt
+++ b/data/tutorials/CAT23001/parametric-analysis-datacard.txt
@@ -2,17 +2,19 @@ imax 1
 jmax 1
 kmax 2
 # ---------------
-shapes data_obs   bin1 parametric-analysis-datacard-input.root w:data_obs
-shapes signal     bin1 parametric-analysis-datacard-input.root w:sig
-shapes background bin1 parametric-analysis-datacard-input.root w:bkg
+shapes data_obs   ch1 parametric-analysis-datacard-input.root w:data_obs
+shapes signal     ch1 parametric-analysis-datacard-input.root w:sig
+shapes background ch1 parametric-analysis-datacard-input.root w:bkg
 # ---------------
-bin                bin1
+bin                ch1
 observation        567
 # ---------------
-bin                bin1   bin1
+bin                ch1   ch1
 process            signal background
 process            0      1
-rate               1      1
+rate               10     1
 # ---------------
 lumi         lnN   1.1    -
 sigma        param 1.0    0.1
+alpha 	     flatParam
+bkg_norm     flatParam
diff --git a/data/tutorials/CAT23001/template-analysis-datacard-input.root b/data/tutorials/CAT23001/template-analysis-datacard-input.root
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diff --git a/data/tutorials/CAT23001/template-analysis-datacard.txt b/data/tutorials/CAT23001/template-analysis-datacard.txt
index 4b22e53d900..693d0c791ad 100644
--- a/data/tutorials/CAT23001/template-analysis-datacard.txt
+++ b/data/tutorials/CAT23001/template-analysis-datacard.txt
@@ -10,7 +10,7 @@ observation 85
 bin             ch1        ch1
 process         signal     background
 process         0          1
-rate            10         100
+rate            24         100
 # --------------------------------
 lumi     lnN    1.1       1.0
 bgnorm   lnN    1.0       1.3

From 728aa2f339492532324c196195cc110407388788 Mon Sep 17 00:00:00 2001
From: Nick Wardle <nckw@cern.ch>
Date: Thu, 14 Dec 2023 10:39:29 +0100
Subject: [PATCH 3/3] Update to paper v12

---
 .../CAT23001/counting-experiment-datacard.txt  | 18 +++++++++---------
 .../CAT23001/example-abcd-datacard.txt         |  6 +++---
 .../CAT23001/template-analysis-datacard.txt    |  4 ++--
 3 files changed, 14 insertions(+), 14 deletions(-)

diff --git a/data/tutorials/CAT23001/counting-experiment-datacard.txt b/data/tutorials/CAT23001/counting-experiment-datacard.txt
index 0eeb480a462..b661aeb731d 100644
--- a/data/tutorials/CAT23001/counting-experiment-datacard.txt
+++ b/data/tutorials/CAT23001/counting-experiment-datacard.txt
@@ -1,15 +1,15 @@
 imax 1
-jmax 3
+jmax 2
 kmax 3
-# A single channel - ch1 - in which we observed 0 events
+# A single channel - ch1 - in which 0 events are observed in data
 bin            ch1
 observation    0
 # ----------
-bin            ch1   ch1   ch1   ch1
-process        ppX   qqWW  ggWW  others
-process        0     1     2     3
-rate           1.47  0.64  0.06  0.22
+bin            ch1   ch1   ch1
+process        ppX   WW    tt
+process        0     1     2     
+rate           1.47  0.64  0.22
 # ----------
-lumi    lnN    1.11    -   1.11    -   
-xs_ggH  lnN    1.16    -     -     -    
-WW_norm gmN 4    -   0.16    -     -   
+lumi    lnN    1.11  1.11   1.11
+xs      lnN    1.20    -     - 
+nWW     gmN 4    -   0.16    - 
diff --git a/data/tutorials/CAT23001/example-abcd-datacard.txt b/data/tutorials/CAT23001/example-abcd-datacard.txt
index 485c4c79967..cf846a949df 100644
--- a/data/tutorials/CAT23001/example-abcd-datacard.txt
+++ b/data/tutorials/CAT23001/example-abcd-datacard.txt
@@ -1,6 +1,6 @@
-imax 4  number of channels
-jmax 1  number of processes -1
-kmax *  number of nuisance parameters (sources of systematical uncertainties)
+imax 4 
+jmax 1 
+kmax * 
 # -------
 bin         B      C      D      A
 observation 50    100     500    16
diff --git a/data/tutorials/CAT23001/template-analysis-datacard.txt b/data/tutorials/CAT23001/template-analysis-datacard.txt
index 693d0c791ad..172a2366c81 100644
--- a/data/tutorials/CAT23001/template-analysis-datacard.txt
+++ b/data/tutorials/CAT23001/template-analysis-datacard.txt
@@ -14,5 +14,5 @@ rate            24         100
 # --------------------------------
 lumi     lnN    1.1       1.0
 bgnorm   lnN    1.0       1.3
-alpha  shape    -          1   uncertainty on background shape and normalization
-sigma  shape    0.5        -   uncertainty on signal resolution. 
+alpha  shape    -          1   # uncertainty on background shape and normalization.
+sigma  shape    0.5        -   # uncertainty on signal shape.