pyproject.toml

[project]
name = "hsf"
version = "1.2.3"
description = "A simple yet exhaustive segmentation tool of the Hippocampal Subfields in T1w and T2w MRIs."
license = {text = "MIT License"}
readme = {file = "README.rst", content-type = "text/x-rst"}
authors = [
    {name = "Clément POIRET", email = "poiret.clement@outlook.fr"}
]
keywords = ["mri", "brain", "hippocampus", "segmentation", "deep learning"]
classifiers = [
    "Development Status :: 5 - Production/Stable",
    "License :: OSI Approved :: MIT License",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Topic :: Scientific/Engineering :: Image Processing"
]
urls = {homepage = "https://hippomnesis.dev", repository = "https://github.com/clementpoiret/ROILoc"}
requires-python = ">=3.9"
dependencies = [
  "antspyx~=0.5.0",
  "hydra-core~=1.3.0",
  "rich>=11.0.0",
  "roiloc>=0.4.1",
  "torchio~=0.20.0",
  "xxhash~=3.2.0",
  "requests>=2.32.3",
  "pytest~=8.0.0",
  "coverage[toml]~=7.6.0",
]

[dependency-groups]
cpu = ["onnxruntime>=1.8.0"]
gpu = ["onnxruntime-gpu>=1.8.0"]
sparse = ["deepsparse>=1.4.0", "onnxruntime>=1.8.0"]

[project.scripts]
hsf = "hsf.factory:start"
deepsparse_support = "hsf.engines:print_deepsparse_support"

[tool.uv]
package = true

[tool.pytest.ini_options]
filterwarnings = ["ignore::DeprecationWarning"]

[tool.coverage.report]
omit = ["hsf/welcome.py"]

[build-system]
requires = ["hatchling"]
build-backend = "hatchling.build"