.gitignore

# ipynb tutorials notebooks are hosted in other repo
docs/source/notebooks/**

# docs local build
**/_build

# mygene package cache
mygene_cache.sqlite

*.html
# vscode related
.vscode/
dynamo/.vscode/

._.DS_Store
~/

venv/
archive/
cache/
data/
figs/
figures/
scripts/
benchmarking/
debug/
integral_seq/
env/

load_model_from_*
dynamo.egg-info/
dynamo_release.egg-info/

# Python / Byte-compiled / optimized / DLL
__pycache__/
*.py[cod]
*.so
.cache
*.h5ad

# always-ignore notebooks
*.ipynb

# OS or Editor files and folders
.DS_Store
Thumbs.db
.ipynb_checkpoints/
.directory
/.idea/

# Docs build
docs/build
docs/source/dynamo*
docs/source/_autosummary

# always-ignore directories
/build/
/dist/

.coverage
test.py

# Docker related:
node_modules/
package-lock.json
public/*.js

# Docker related:
debug/numbers_in_dynamo_first_revision.py
dynamo/tools/DDRTree.py
dynamo/tools/psl.py