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I am trying to stop CARACal running the elevation plots, setting obsconf:obsinfo:plotelev to false, but it will not take the command - I get the following error:
I copied a different plot into the obsinfo folder and changed the name to lbv2_5500-elevation-tracks.png, but it still tries to run plotelev even though the file exists. That error below.
Not sure what to do?
thanks!
Peter
job started at 2023-09-12 09:12:01.397796
Starting container [elevation_plots_ms0-14038047218270416945027213380814]. Timeout set to -1. The container ID is printed below.
running cd /scratch3/projects/orcs/zac/5500/.stimela_workdir-1694502721323329 && singularity run --workdir /scratch3/projects/orcs/zac/5500/.stimela_workdir-1694502721323329 --containall --bind /scratch3/projry
WARNING: Overriding HOME environment variable with SINGULARITYENV_HOME is not permitted
2023-09-12 09:12:06: Initial memory state:
2023-09-12 09:12:06: total used free shared buff/cache available
2023-09-12 09:12:06: Mem: 236G 10G 174G 2.9M 51G 224G
2023-09-12 09:12:06: Swap: 0B 0B 0B
2023-09-12 09:12:06: Running plot-elevation-tracks.py --output-name /stimela_mount/output/lbv2_5500-elevation-tracks.png /stimela_mount/msdir/lbv2_5500.ms
Fields in /stimela_mount/msdir/lbv2_5500.ms:
Traceback (most recent call last):
File "/usr/local/bin/plot-elevation-tracks.py", line 60, in <module>
field_time, field_radec, obs_xyz, scans = LSTElevationPlot.load_ms_fields(msname, verbose=1)
File "/usr/local/lib/python3.6/dist-packages/Owlcat/Plotting.py", line 1167, in load_ms_fields
time_ts = np.array([timestamps[row0] for row0 in first_row_per_ts]) # time per timestamp
File "/usr/local/lib/python3.6/dist-packages/Owlcat/Plotting.py", line 1167, in <listcomp>
time_ts = np.array([timestamps[row0] for row0 in first_row_per_ts]) # time per timestamp
IndexError: index 121304 is out of bounds for axis 0 with size 121304
2023-09-12 09:12:12: plot-elevation-tracks.py exited with code 1
cd /scratch3/projects/orcs/zac/5500/.stimela_workdir-1694502721323329 && singularity run --workdir /scratch3/projects/orcs/zac/5500/.stimela_workdir-1694502721323329 --containall returns error code 1
job failed at 2023-09-12 09:12:12.311261 after 0:00:10.913465
Traceback (most recent call last):
File "/scratch3/projects/orcs/orc23_caracal_2/venv_orc23/lib/python3.9/site-packages/stimela/recipe.py", line 713, in run
job.run_job()
File "/scratch3/projects/orcs/orc23_caracal_2/venv_orc23/lib/python3.9/site-packages/stimela/recipe.py", line 425, in run_job
self.job.run(output_wrangler=self.apply_output_wranglers)
File "/scratch3/projects/orcs/orc23_caracal_2/venv_orc23/lib/python3.9/site-packages/stimela/singularity.py", line 123, in run
utils.xrun(f"cd {self.execdir} && singularity run --workdir {self.execdir} --containall",
File "/scratch3/projects/orcs/orc23_caracal_2/venv_orc23/lib/python3.9/site-packages/stimela/utils/xrun_poll.py", line 227, in xrun
raise StimelaCabRuntimeError("{} returns error code {}".format(command_name, status))
stimela.utils.StimelaCabRuntimeError: cd /scratch3/projects/orcs/zac/5500/.stimela_workdir-1694502721323329 && singularity run --workdir /scratch3/projects/orcs/zac/5500/.stimela_workdir-1694502721323329 --coni1
log-obsconf-elevation-plots-ms0-20230912-091156.txt (END)
The text was updated successfully, but these errors were encountered:
hi team,
I am trying to stop CARACal running the elevation plots, setting obsconf:obsinfo:plotelev to false, but it will not take the command - I get the following error:
Commands were taken from https://caracal.readthedocs.io/en/latest/manual/workers/obsconf/
I copied a different plot into the obsinfo folder and changed the name to
lbv2_5500-elevation-tracks.png
, but it still tries to run plotelev even though the file exists. That error below.Not sure what to do?
thanks!
Peter
The text was updated successfully, but these errors were encountered: