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@cape-ph

Center for Applied Pathogen Epidemiology and Outbreak Control

README.md

Center for Applied Pathogen Epidemiology and Outbreak Control

Popular repositories Loading

  1. cape-cod cape-cod Public

    This is the main repository for the CAPE infrastructure as code.

    Python 2

  2. cape-baby-steps cape-baby-steps Public

    Repo containing a phased architecture test for CAPE AWS stacks

    1

  3. r-nextflow-template r-nextflow-template Public

    R

  4. nf-tower nf-tower Public

    Forked from seqeralabs/nf-tower

    Nextflow Tower system

    Groovy

  5. bactopia-baseline bactopia-baseline Public

    A vagrant VM to provide a baseline for running the bactopia pipeline

    Shell

  6. bell-lapadula bell-lapadula Public

    Bell-LaPadula model for confidentiality of public health data stored in information systems

    Python

Repositories

Showing 10 of 19 repositories
  • cape-cod Public

    This is the main repository for the CAPE infrastructure as code.

    cape-ph/cape-cod’s past year of commit activity
    Python 2 Apache-2.0 0 53 0 Updated Dec 12, 2024
  • arlog Public

    Package to process files for AR Log database creation.

    cape-ph/arlog’s past year of commit activity
    R 0 MIT 0 0 0 Updated Dec 6, 2024
  • haiarlogdb Public archive
    cape-ph/haiarlogdb’s past year of commit activity
    R 0 MIT 0 0 0 Updated Dec 5, 2024
  • aws-jupyterhub-tljh-ami Public

    AMI for TLJH Ubuntu 24.04.

    cape-ph/aws-jupyterhub-tljh-ami’s past year of commit activity
    HCL 0 Apache-2.0 0 4 0 Updated Nov 20, 2024
  • capepy Public

    A collection of utility functions useful for developing on and interacting with the CAPE infrastructure

    cape-ph/capepy’s past year of commit activity
    Python 0 Apache-2.0 0 3 1 Updated Nov 8, 2024
  • .github Public

    CAPE organization shared github configuration

    cape-ph/.github’s past year of commit activity
    0 0 0 1 Updated Nov 8, 2024
  • etl-gphl-cre-alert Public

    Repo containing the Epi/HAI ETL for a GDPH CRE alert

    cape-ph/etl-gphl-cre-alert’s past year of commit activity
    Python 0 Apache-2.0 0 2 0 Updated Nov 8, 2024
  • etl-tnl-alert Public

    Repo containing the Epi/HAI ETL for a Tennessee Lab alert

    cape-ph/etl-tnl-alert’s past year of commit activity
    Python 0 Apache-2.0 0 1 0 Updated Nov 8, 2024
  • etl-gphl-sequencing-alert Public
    cape-ph/etl-gphl-sequencing-alert’s past year of commit activity
    Python 0 Apache-2.0 0 1 0 Updated Nov 8, 2024
  • etl-template Public template

    Template repository for creating ETL scripts for the CAPE COD system

    cape-ph/etl-template’s past year of commit activity
    Python 0 Apache-2.0 0 3 0 Updated Nov 8, 2024
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