NAMESPACE

# Generated by roxygen2: do not edit by hand

export(ComBat)
export(ComBat_seq)
export(empirical.controls)
export(f.pvalue)
export(fstats)
export(fsva)
export(irwsva.build)
export(num.sv)
export(psva)
export(qsva)
export(read.degradation.matrix)
export(ssva)
export(sva)
export(sva.check)
export(sva_network)
export(svaseq)
export(twostepsva.build)
import(BiocParallel)
import(genefilter)
import(matrixStats, except = c(rowSds, rowVars))

import(mgcv)
importFrom(edgeR,DGEList)
importFrom(edgeR,estimateGLMCommonDisp)
importFrom(edgeR,estimateGLMTagwiseDisp)
importFrom(edgeR,getOffset)
importFrom(edgeR,glmFit)
importFrom(edgeR,glmFit.default)
importFrom(graphics,lines)
importFrom(graphics,par)
importFrom(limma,lmFit)
importFrom(stats,cor)
importFrom(stats,density)
importFrom(stats,dnbinom)
importFrom(stats,dnorm)
importFrom(stats,lm)
importFrom(stats,model.matrix)
importFrom(stats,pf)
importFrom(stats,pnbinom)
importFrom(stats,ppoints)
importFrom(stats,prcomp)
importFrom(stats,predict)
importFrom(stats,qgamma)
importFrom(stats,qnbinom)
importFrom(stats,qnorm)
importFrom(stats,qqline)
importFrom(stats,qqnorm)
importFrom(stats,qqplot)
importFrom(stats,smooth.spline)
importFrom(stats,var)
importFrom(utils,capture.output)
importFrom(utils,read.delim)
useDynLib(sva, .registration = TRUE)