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<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.0 Transitional//EN" "http://www.w3.org/TR/xhtml1/DTD/xhtml1-transitional.dtd">
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 <span id="projectnumber">0.3.0</span>
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<div id="projectbrief">by Peter Athron, Csaba Balazs, Michael Bardsley, Andrew Fowlie, Dylan Harries & Graham White</div>
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<li class="navelem"><a class="el" href="namespaceBubbleProfiler.html">BubbleProfiler</a></li><li class="navelem"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html">Algebraic_potential</a></li> </ul>
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<a href="#pub-methods">Public Member Functions</a> |
<a href="#pri-methods">Private Member Functions</a> |
<a href="#pri-attribs">Private Attributes</a> |
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<div class="title">BubbleProfiler::Algebraic_potential Class Reference</div> </div>
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<p>Implements a multi dimensional scalar field potential, which may be expressed as almost any algerbraic fucntion.
<a href="classBubbleProfiler_1_1Algebraic__potential.html#details">More...</a></p>
<p><code>#include <<a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>></code></p>
<div class="dynheader">
Inheritance diagram for BubbleProfiler::Algebraic_potential:</div>
<div class="dyncontent">
<div class="center"><img src="classBubbleProfiler_1_1Algebraic__potential__inherit__graph.png" border="0" usemap="#BubbleProfiler_1_1Algebraic__potential_inherit__map" alt="Inheritance graph"/></div>
<map name="BubbleProfiler_1_1Algebraic__potential_inherit__map" id="BubbleProfiler_1_1Algebraic__potential_inherit__map">
<area shape="rect" id="node2" href="classBubbleProfiler_1_1Potential.html" title="Abstract base class for a generic potential. " alt="" coords="5,5,228,32"/>
</map>
<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
<div class="dynheader">
Collaboration diagram for BubbleProfiler::Algebraic_potential:</div>
<div class="dyncontent">
<div class="center"><img src="classBubbleProfiler_1_1Algebraic__potential__coll__graph.png" border="0" usemap="#BubbleProfiler_1_1Algebraic__potential_coll__map" alt="Collaboration graph"/></div>
<map name="BubbleProfiler_1_1Algebraic__potential_coll__map" id="BubbleProfiler_1_1Algebraic__potential_coll__map">
<area shape="rect" id="node2" href="classBubbleProfiler_1_1Potential.html" title="Abstract base class for a generic potential. " alt="" coords="5,13,228,39"/>
<area shape="rect" id="node3" href="classBubbleProfiler_1_1logging_1_1Basic__logger.html" title="BubbleProfiler::logging\l::Basic_logger" alt="" coords="252,5,459,47"/>
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<center><span class="legend">[<a href="graph_legend.html">legend</a>]</span></center></div>
<table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pub-methods"></a>
Public Member Functions</h2></td></tr>
<tr class="memitem:a84fab502351607e8713cb3e5fd2595aa"><td class="memItemLeft" align="right" valign="top"> </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a84fab502351607e8713cb3e5fd2595aa">Algebraic_potential</a> (const std::vector< std::string > &<a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a16dfc34ec86f975c4f8d85038780ced0">fields</a>, const std::string &expr)</td></tr>
<tr class="memdesc:a84fab502351607e8713cb3e5fd2595aa"><td class="mdescLeft"> </td><td class="mdescRight">Construct from list of fields and GiNaC potential string. <a href="#a84fab502351607e8713cb3e5fd2595aa">More...</a><br /></td></tr>
<tr class="separator:a84fab502351607e8713cb3e5fd2595aa"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a94d46047ecd409b4ef2e9b5d1d832e69"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a94d46047ecd409b4ef2e9b5d1d832e69">~Algebraic_potential</a> ()=default</td></tr>
<tr class="separator:a94d46047ecd409b4ef2e9b5d1d832e69"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a1a384fcedb27bfdbd594f33cdc4c6656"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html">Algebraic_potential</a> * </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a1a384fcedb27bfdbd594f33cdc4c6656">clone</a> () const </td></tr>
<tr class="memdesc:a1a384fcedb27bfdbd594f33cdc4c6656"><td class="mdescLeft"> </td><td class="mdescRight">Get a fresh copy of this potential. <a href="#a1a384fcedb27bfdbd594f33cdc4c6656">More...</a><br /></td></tr>
<tr class="separator:a1a384fcedb27bfdbd594f33cdc4c6656"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a06a718445c7a2fe696165afebe7e9071"><td class="memItemLeft" align="right" valign="top">virtual double </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a06a718445c7a2fe696165afebe7e9071">operator()</a> (const Eigen::VectorXd &coords) const override</td></tr>
<tr class="memdesc:a06a718445c7a2fe696165afebe7e9071"><td class="mdescLeft"> </td><td class="mdescRight">Evaluate potential at point. <a href="#a06a718445c7a2fe696165afebe7e9071">More...</a><br /></td></tr>
<tr class="separator:a06a718445c7a2fe696165afebe7e9071"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a7898036218702a00c3cc07e10577a54f"><td class="memItemLeft" align="right" valign="top">virtual double </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a7898036218702a00c3cc07e10577a54f">partial</a> (const Eigen::VectorXd &coords, int i) const override</td></tr>
<tr class="memdesc:a7898036218702a00c3cc07e10577a54f"><td class="mdescLeft"> </td><td class="mdescRight">Partial derivative WRT coordinate i at a point. <a href="#a7898036218702a00c3cc07e10577a54f">More...</a><br /></td></tr>
<tr class="separator:a7898036218702a00c3cc07e10577a54f"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ae80f623d515e38abf47ed90684b859e0"><td class="memItemLeft" align="right" valign="top">virtual double </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#ae80f623d515e38abf47ed90684b859e0">partial</a> (const Eigen::VectorXd &coords, int i, int j) const override</td></tr>
<tr class="memdesc:ae80f623d515e38abf47ed90684b859e0"><td class="mdescLeft"> </td><td class="mdescRight">Partial derivative WRT coordinates i, j at a a point. <a href="#ae80f623d515e38abf47ed90684b859e0">More...</a><br /></td></tr>
<tr class="separator:ae80f623d515e38abf47ed90684b859e0"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:a3f8e06addb6d54914c28c056e11f95e5"><td class="memItemLeft" align="right" valign="top">virtual std::size_t </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a3f8e06addb6d54914c28c056e11f95e5">get_number_of_fields</a> () const override</td></tr>
<tr class="separator:a3f8e06addb6d54914c28c056e11f95e5"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aac9d2d4085dca1af791c06b3b8fdeb5d"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#aac9d2d4085dca1af791c06b3b8fdeb5d">translate_origin</a> (const Eigen::VectorXd &) override</td></tr>
<tr class="memdesc:aac9d2d4085dca1af791c06b3b8fdeb5d"><td class="mdescLeft"> </td><td class="mdescRight">Shift the location of the origin by a specified vector. <a href="#aac9d2d4085dca1af791c06b3b8fdeb5d">More...</a><br /></td></tr>
<tr class="separator:aac9d2d4085dca1af791c06b3b8fdeb5d"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:ab647bd7c8e2fb1fa93d34835b2310bc0"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#ab647bd7c8e2fb1fa93d34835b2310bc0">apply_basis_change</a> (const Eigen::MatrixXd &) override</td></tr>
<tr class="memdesc:ab647bd7c8e2fb1fa93d34835b2310bc0"><td class="mdescLeft"> </td><td class="mdescRight">Apply a change of basis matrix. <a href="#ab647bd7c8e2fb1fa93d34835b2310bc0">More...</a><br /></td></tr>
<tr class="separator:ab647bd7c8e2fb1fa93d34835b2310bc0"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="memitem:aaaed04680c473a0ed0e81f611074bf08"><td class="memItemLeft" align="right" valign="top">virtual void </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#aaaed04680c473a0ed0e81f611074bf08">add_constant_term</a> (double) override</td></tr>
<tr class="memdesc:aaaed04680c473a0ed0e81f611074bf08"><td class="mdescLeft"> </td><td class="mdescRight">Add a constant offset to the potential. <a href="#aaaed04680c473a0ed0e81f611074bf08">More...</a><br /></td></tr>
<tr class="separator:aaaed04680c473a0ed0e81f611074bf08"><td class="memSeparator" colspan="2"> </td></tr>
<tr class="inherit_header pub_methods_classBubbleProfiler_1_1Potential"><td colspan="2" onclick="javascript:toggleInherit('pub_methods_classBubbleProfiler_1_1Potential')"><img src="closed.png" alt="-"/> Public Member Functions inherited from <a class="el" href="classBubbleProfiler_1_1Potential.html">BubbleProfiler::Potential</a></td></tr>
<tr class="memitem:a59e38ef393e7e04037c27cc583312d1d inherit pub_methods_classBubbleProfiler_1_1Potential"><td class="memItemLeft" align="right" valign="top">virtual </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Potential.html#a59e38ef393e7e04037c27cc583312d1d">~Potential</a> ()=default</td></tr>
<tr class="separator:a59e38ef393e7e04037c27cc583312d1d inherit pub_methods_classBubbleProfiler_1_1Potential"><td class="memSeparator" colspan="2"> </td></tr>
</table><table class="memberdecls">
<tr class="heading"><td colspan="2"><h2 class="groupheader"><a name="pri-methods"></a>
Private Member Functions</h2></td></tr>
<tr class="memitem:a55ef88e8eaa9610ebd019ab032098bee"><td class="memItemLeft" align="right" valign="top">double </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a55ef88e8eaa9610ebd019ab032098bee">eval</a> (const GiNaC::ex &, const Eigen::VectorXd &) const </td></tr>
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<tr class="memitem:a95d3ab2ab7e9ae2191dbc1af81ff4cf7"><td class="memItemLeft" align="right" valign="top">void </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a95d3ab2ab7e9ae2191dbc1af81ff4cf7">build_derivatives</a> ()</td></tr>
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Private Attributes</h2></td></tr>
<tr class="memitem:a16dfc34ec86f975c4f8d85038780ced0"><td class="memItemLeft" align="right" valign="top">std::vector< std::string > </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a16dfc34ec86f975c4f8d85038780ced0">fields</a> {}</td></tr>
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<tr class="memitem:aff607987756992b34ee7921139478f5a"><td class="memItemLeft" align="right" valign="top">GiNaC::ex </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#aff607987756992b34ee7921139478f5a">v</a> {}</td></tr>
<tr class="memdesc:aff607987756992b34ee7921139478f5a"><td class="mdescLeft"> </td><td class="mdescRight">GiNaC expression to hold potential. <a href="#aff607987756992b34ee7921139478f5a">More...</a><br /></td></tr>
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<tr class="memitem:adc53e77dcecdb127f2a1f03fcf3f0b72"><td class="memItemLeft" align="right" valign="top">std::vector< GiNaC::ex > </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#adc53e77dcecdb127f2a1f03fcf3f0b72">first_partials</a> {}</td></tr>
<tr class="memdesc:adc53e77dcecdb127f2a1f03fcf3f0b72"><td class="mdescLeft"> </td><td class="mdescRight">First partials. <a href="#adc53e77dcecdb127f2a1f03fcf3f0b72">More...</a><br /></td></tr>
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<tr class="memitem:aee05a645a0f760ea284aefac2092f5eb"><td class="memItemLeft" align="right" valign="top">std::vector< std::vector< GiNaC::ex > > </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#aee05a645a0f760ea284aefac2092f5eb">second_partials</a> {}</td></tr>
<tr class="memdesc:aee05a645a0f760ea284aefac2092f5eb"><td class="mdescLeft"> </td><td class="mdescRight">Second partials. <a href="#aee05a645a0f760ea284aefac2092f5eb">More...</a><br /></td></tr>
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<tr class="memitem:a9982ab3be66bc4ffc23baef222ef5ce6"><td class="memItemLeft" align="right" valign="top">std::vector< GiNaC::symbol > </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#a9982ab3be66bc4ffc23baef222ef5ce6">syms</a> {}</td></tr>
<tr class="memdesc:a9982ab3be66bc4ffc23baef222ef5ce6"><td class="mdescLeft"> </td><td class="mdescRight">GiNaC symbols matched to fields vec. <a href="#a9982ab3be66bc4ffc23baef222ef5ce6">More...</a><br /></td></tr>
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<tr class="memitem:adf624c352741260ed07c7717d324f2f9"><td class="memItemLeft" align="right" valign="top"><a class="el" href="classBubbleProfiler_1_1logging_1_1Basic__logger.html">logging::Basic_logger</a> </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#adf624c352741260ed07c7717d324f2f9">logger</a> {}</td></tr>
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Friends</h2></td></tr>
<tr class="memitem:acb76d6b891d3aea1e07460d1f9e61c6d"><td class="memItemLeft" align="right" valign="top">std::ostream & </td><td class="memItemRight" valign="bottom"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html#acb76d6b891d3aea1e07460d1f9e61c6d">operator<<</a> (std::ostream &os, const <a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html">Algebraic_potential</a> &p)</td></tr>
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<a name="details" id="details"></a><h2 class="groupheader">Detailed Description</h2>
<div class="textblock"><p>Implements a multi dimensional scalar field potential, which may be expressed as almost any algerbraic fucntion. </p>
<p>Given a vector of field names, and a GiNaCs expression specifying a scalar function of these fields, this class provides a an implementation of <a class="el" href="classBubbleProfiler_1_1Potential.html" title="Abstract base class for a generic potential. ">Potential</a> suitable for calculating bubble profiles.</p>
<p>For the profiler to work correctly, the potential should be a fourth degree polynomial. </p>
<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00036">36</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
</div><h2 class="groupheader">Constructor & Destructor Documentation</h2>
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<td class="memname">BubbleProfiler::Algebraic_potential::Algebraic_potential </td>
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<td class="paramtype">const std::vector< std::string > & </td>
<td class="paramname"><em>fields</em>, </td>
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<td class="paramname"><em>expr</em> </td>
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<p>Construct from list of fields and GiNaC potential string. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">fields</td><td>vector of field names. These must match the fields in expr. </td></tr>
<tr><td class="paramname">expr</td><td>specification of potential in GiNaCs syntax.</td></tr>
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</dd>
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<p>Note that the potential is expected to be a quartic multivariate polynomial in the specified fields. </p>
<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00026">26</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00049">build_derivatives()</a>, <a class="el" href="basic__logger_8cpp_source.html#l00024">BubbleProfiler::logging::Basic_logger::log_message()</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00079">logger</a>, <a class="el" href="sm__plus__singlet_8py_source.html#l00110">sm_plus_singlet::parser</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00078">syms</a>, <a class="el" href="namespaceBubbleProfiler_1_1logging.html#ab9e7a962f5b8891f8306783be2218661add4ec0ac4e58f7c32a01244ae91150b1">BubbleProfiler::logging::Trace</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00075">v</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8hpp_source.html#l00052">clone()</a>.</p>
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<td class="memname">virtual BubbleProfiler::Algebraic_potential::~Algebraic_potential </td>
<td>(</td>
<td class="paramname"></td><td>)</td>
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<h2 class="groupheader">Member Function Documentation</h2>
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<td class="memname">void BubbleProfiler::Algebraic_potential::add_constant_term </td>
<td>(</td>
<td class="paramtype">double </td>
<td class="paramname"><em>offset</em></td><td>)</td>
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<p>Add a constant offset to the potential. </p>
<dl class="params"><dt>Parameters</dt><dd>
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<tr><td class="paramname">offset</td><td>constant term to add to potential </td></tr>
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</dd>
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<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#ac7c4b5d0e316bcb4125d8c47d1ae5f89">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00132">132</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="basic__logger_8cpp_source.html#l00024">BubbleProfiler::logging::Basic_logger::log_message()</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00079">logger</a>, <a class="el" href="namespaceBubbleProfiler_1_1logging.html#ab9e7a962f5b8891f8306783be2218661add4ec0ac4e58f7c32a01244ae91150b1">BubbleProfiler::logging::Trace</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00075">v</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8hpp_source.html#l00059">get_number_of_fields()</a>.</p>
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<td class="memname">void BubbleProfiler::Algebraic_potential::apply_basis_change </td>
<td>(</td>
<td class="paramtype">const Eigen::MatrixXd & </td>
<td class="paramname"><em>cob_matrix</em></td><td>)</td>
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<p>Apply a change of basis matrix. </p>
<dl class="params"><dt>Parameters</dt><dd>
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<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#a6ed9bc5a48bbfc861646ab3d49a7b84d">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00096">96</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00049">build_derivatives()</a>, <a class="el" href="basic__logger_8cpp_source.html#l00024">BubbleProfiler::logging::Basic_logger::log_message()</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00079">logger</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00078">syms</a>, <a class="el" href="namespaceBubbleProfiler_1_1logging.html#ab9e7a962f5b8891f8306783be2218661add4ec0ac4e58f7c32a01244ae91150b1">BubbleProfiler::logging::Trace</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00075">v</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8hpp_source.html#l00059">get_number_of_fields()</a>.</p>
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<td class="memname">void BubbleProfiler::Algebraic_potential::build_derivatives </td>
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<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00049">49</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8hpp_source.html#l00076">first_partials</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00077">second_partials</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00078">syms</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00075">v</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8cpp_source.html#l00026">Algebraic_potential()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00096">apply_basis_change()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00069">translate_origin()</a>.</p>
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<td class="memname"><a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html">Algebraic_potential</a>* BubbleProfiler::Algebraic_potential::clone </td>
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<p>Get a fresh copy of this potential. </p>
<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#ae363fa53c931a5285eea618ad54882d8">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00052">52</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00026">Algebraic_potential()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00166">operator()()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00172">partial()</a>.</p>
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<td class="memname">double BubbleProfiler::Algebraic_potential::eval </td>
<td>(</td>
<td class="paramtype">const GiNaC::ex & </td>
<td class="paramname"><em>expr</em>, </td>
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<td class="paramtype">const Eigen::VectorXd & </td>
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<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00143">143</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8hpp_source.html#l00078">syms</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8cpp_source.html#l00166">operator()()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00172">partial()</a>.</p>
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<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#a7d019ca298e198b0bd729a9ffb71dde1">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00059">59</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00132">add_constant_term()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00096">apply_basis_change()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00069">translate_origin()</a>.</p>
<p>Referenced by <a class="el" href="run__cmd__line__potential_8cpp_source.html#l00599">BubbleProfiler::run_perturbative_profiler()</a>, and <a class="el" href="run__cmd__line__potential_8cpp_source.html#l00542">BubbleProfiler::run_shooting_profiler()</a>.</p>
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<p>Evaluate potential at point. </p>
<dl class="params"><dt>Parameters</dt><dd>
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<tr><td class="paramname">coords</td><td>Coordinates at which to evaluate </td></tr>
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<dl class="section return"><dt>Returns</dt><dd>Value of potential at coordinates </dd></dl>
<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#af5dab482749f18ed8957a927202ce238">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00166">166</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00143">eval()</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00075">v</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8hpp_source.html#l00052">clone()</a>.</p>
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<p>Partial derivative WRT coordinate i at a point. </p>
<dl class="params"><dt>Parameters</dt><dd>
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<tr><td class="paramname">coords</td><td>Coordinates at which to evaluate </td></tr>
<tr><td class="paramname">i</td><td>Index of coordinate to be differentiated </td></tr>
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</dd>
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<dl class="section return"><dt>Returns</dt><dd>Value of specified partial at point </dd></dl>
<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#abc339f1b3b267874ca300f1976b660d0">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00172">172</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00143">eval()</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00076">first_partials</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8hpp_source.html#l00052">clone()</a>.</p>
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<td class="memname">double BubbleProfiler::Algebraic_potential::partial </td>
<td>(</td>
<td class="paramtype">const Eigen::VectorXd & </td>
<td class="paramname"><em>coords</em>, </td>
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<td class="paramtype">int </td>
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<td class="paramtype">int </td>
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<td>)</td>
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<p>Partial derivative WRT coordinates i, j at a a point. </p>
<dl class="params"><dt>Parameters</dt><dd>
<table class="params">
<tr><td class="paramname">coords</td><td>Coordinates at which to evaluate </td></tr>
<tr><td class="paramname">i</td><td>Index of first coordinate to be differentiated </td></tr>
<tr><td class="paramname">j</td><td>Index of second coordinate to be differentiated </td></tr>
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</dd>
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<dl class="section return"><dt>Returns</dt><dd>Value of specified partial at point </dd></dl>
<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#a48637722a16384af75596493ba7ea9e5">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00178">178</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00143">eval()</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00077">second_partials</a>.</p>
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<td class="memname">void BubbleProfiler::Algebraic_potential::translate_origin </td>
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<td class="paramtype">const Eigen::VectorXd & </td>
<td class="paramname"><em>translation</em></td><td>)</td>
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<p>Shift the location of the origin by a specified vector. </p>
<dl class="params"><dt>Parameters</dt><dd>
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<tr><td class="paramname">translation</td><td>shift of origin </td></tr>
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</dd>
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<p>Implements <a class="el" href="classBubbleProfiler_1_1Potential.html#ab12c5bb8d8fb565cdf2d14ccee74e769">BubbleProfiler::Potential</a>.</p>
<p>Definition at line <a class="el" href="algebraic__potential_8cpp_source.html#l00069">69</a> of file <a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a>.</p>
<p>References <a class="el" href="algebraic__potential_8cpp_source.html#l00049">build_derivatives()</a>, <a class="el" href="basic__logger_8cpp_source.html#l00024">BubbleProfiler::logging::Basic_logger::log_message()</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00079">logger</a>, <a class="el" href="algebraic__potential_8hpp_source.html#l00078">syms</a>, <a class="el" href="namespaceBubbleProfiler_1_1logging.html#ab9e7a962f5b8891f8306783be2218661add4ec0ac4e58f7c32a01244ae91150b1">BubbleProfiler::logging::Trace</a>, and <a class="el" href="algebraic__potential_8hpp_source.html#l00075">v</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8hpp_source.html#l00059">get_number_of_fields()</a>.</p>
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<h2 class="groupheader">Friends And Related Function Documentation</h2>
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<td class="memname">std::ostream& operator<< </td>
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<td class="paramname"><em>os</em>, </td>
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<td class="paramtype">const <a class="el" href="classBubbleProfiler_1_1Algebraic__potential.html">Algebraic_potential</a> & </td>
<td class="paramname"><em>p</em> </td>
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<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00067">67</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
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<h2 class="groupheader">Member Data Documentation</h2>
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<td class="memname">std::vector<std::string> BubbleProfiler::Algebraic_potential::fields {}</td>
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<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00074">74</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
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<td class="memname">std::vector<GiNaC::ex> BubbleProfiler::Algebraic_potential::first_partials {}</td>
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<p>First partials. </p>
<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00076">76</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8cpp_source.html#l00049">build_derivatives()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00172">partial()</a>.</p>
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<td class="memname"><a class="el" href="classBubbleProfiler_1_1logging_1_1Basic__logger.html">logging::Basic_logger</a> BubbleProfiler::Algebraic_potential::logger {}</td>
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<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00079">79</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8cpp_source.html#l00132">add_constant_term()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00026">Algebraic_potential()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00096">apply_basis_change()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00069">translate_origin()</a>.</p>
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<td class="memname">std::vector<std::vector<GiNaC::ex> > BubbleProfiler::Algebraic_potential::second_partials {}</td>
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<p>Second partials. </p>
<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00077">77</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8cpp_source.html#l00049">build_derivatives()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00178">partial()</a>.</p>
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<td class="memname">std::vector<GiNaC::symbol> BubbleProfiler::Algebraic_potential::syms {}</td>
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<p>GiNaC symbols matched to fields vec. </p>
<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00078">78</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8cpp_source.html#l00026">Algebraic_potential()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00096">apply_basis_change()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00049">build_derivatives()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00143">eval()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00069">translate_origin()</a>.</p>
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<td class="memname">GiNaC::ex BubbleProfiler::Algebraic_potential::v {}</td>
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<p>GiNaC expression to hold potential. </p>
<p>Definition at line <a class="el" href="algebraic__potential_8hpp_source.html#l00075">75</a> of file <a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a>.</p>
<p>Referenced by <a class="el" href="algebraic__potential_8cpp_source.html#l00132">add_constant_term()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00026">Algebraic_potential()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00096">apply_basis_change()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00049">build_derivatives()</a>, <a class="el" href="algebraic__potential_8cpp_source.html#l00166">operator()()</a>, and <a class="el" href="algebraic__potential_8cpp_source.html#l00069">translate_origin()</a>.</p>
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<hr/>The documentation for this class was generated from the following files:<ul>
<li>/home/michael/bubbleprofiler_release/include/<a class="el" href="algebraic__potential_8hpp_source.html">algebraic_potential.hpp</a></li>
<li>/home/michael/bubbleprofiler_release/src/<a class="el" href="algebraic__potential_8cpp_source.html">algebraic_potential.cpp</a></li>
</ul>
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