allele-specific information

[ZWael]

Hello ichorCNA Team,

Thank you for developing such a valuable tool!
I have a question regarding the segmentation file outputs. I noticed that the "copy.number" represents the total copy number.
However, I'm interested in obtaining information on the minor and major alleles separately.
Does ichorCNA provide this information, or would you recommend an additional tool for allele-specific copy number in ultra-low-pass whole genome samples?

Thank you.