test.sh

#!/bin/bash

# cp ./microservice/register.json ./regtest.json
# register_file='./regtest.json'
register_file='./microservice/register.json'
register_template=$(<register_template.txt)

# cp ./polyIntersect/routes/api/v1/polyIntersect_router.py ./routertest.py
# router_file='./routertest.py'
router_file='./polyIntersect/routes/api/v1/polyIntersect_router.py'
router_template=$(<endpoint_template.txt)

# access analysis -> datasets dictionary
. endpoint_datasets.config
declare -A ANALYSES
echo $ANALYSIS

sed -i "s/ANALYSIS_KEY/$ANALYSIS/g" $register_file
sed -i "s/ANALYSIS_KEY/$ANALYSIS/g" $router_file

# loop through datasets, adding a view and registration entry for each
for dataset in ${!ANALYSES[$ANALYSIS]}; do
	echo $dataset
	funcname=$(echo $dataset | sed "s@-@@g" )
	if [ $dataset = 'none' ]; then
		dataset=''
		endpoint=''
	else
		endpoint='/'$dataset
	fi

	# update register json
	register_addition=$(echo $register_template | sed "s@_ENDPOINT@${endpoint}@g" | sed "s@ANALYSIS_KEY@${ANALYSIS}@g")
	sed -i "s@}]@${register_addition}@" $register_file

	# update router file
	router_addition=$(echo $router_template | sed "s@DATASET@${dataset}@g" | sed "s@FUNCTION@${funcname}@g" | sed "s@_ENDPOINT@${endpoint}@g" | sed "s@ANALYSIS_KEY@${ANALYSIS}@g")
	sed -i "$ a ${router_addition}" $router_file
done